RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 HDCP19113 662 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 NME5P56597 212 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 TWF1Q12792 350 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 STX3Q13277 289 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 MPP3Q13368 585 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 CSHL1Q14406 222 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 FBXL22Q6P050 247 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 C6orf89Q6UWU4 347 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 NAPRTQ6XQN6 538 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 NSMCE1Q8WV22 266 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 TSNARE1Q96NA8 513 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 MUC3BQ9H195 1237 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 USP3Q9Y6I4 520 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 SPEGQ15772 3267 aa12.15□□□□□ -0.47
TMEM38B-202ENST00000374692 BPTFQ12830 3046 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 HMX2A2RU54 273 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 RFPL1O75677 317 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ZWINTO95229 277 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 HSPA4LO95757 839 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 F9P00740 461 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ITGB6P18564 788 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 GKP32189 559 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 NCALDP61601 193 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 GRM3Q14832 879 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 PDCD2Q16342 344 aaPredicted RBP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ANO4Q32M45 955 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ANKRD20A4Q4UJ75 823 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ZNF789Q5FWF6 425 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ARNTL2Q8WYA1 636 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 NMUR2Q9GZQ4 415 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 SNX15Q9NRS6 342 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 UXTQ9UBK9 157 aaPredicted RBP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 FDFT1P37268 417 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 PRAMEP78395 509 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 LHX8Q68G74 356 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 FSTL4Q6MZW2 842 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 LONP2Q86WA8 852 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 CACUL1Q86Y37 369 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 COLGALT2Q8IYK4 626 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 CARNMT1Q8N4J0 409 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 SEPT8Q92599 483 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 SEMA3CQ99985 751 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 C11orf84Q9BUA3 381 aaPredicted RBP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 CERS4Q9HA82 394 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 UTP6Q9NYH9 597 aaKnown RBP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 PCDHGC4Q9Y5F7 938 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 CFLARO15519 480 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 TOMM70O94826 608 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 HAUS5O94927 633 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ESRRAP11474 423 aaPredicted RBP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 ELF1P32519 619 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 SEMA5AQ13591 1074 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 POLD3Q15054 466 aaPredicted RBP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 LRRC36Q1X8D7 754 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 HABP4Q5JVS0 413 aaKnown RBP12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 CRLF3Q8IUI8 442 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 KCTD13Q8WZ19 329 aa12.14□□□□□ -0.47
TMEM38B-202ENST00000374692 TRIOO75962 3097 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 C2orf78A6NCI8 922 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 FKTNO75072 461 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 ENTPD5O75356 428 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 PGAM1P18669 254 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 WNT3AP56704 352 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 BTG3Q14201 252 aaPredicted RBP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 MARC1Q5VT66 337 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 CES4AQ5XG92 561 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 ITPRIPL1Q6GPH6 555 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 PARP9Q8IXQ6 854 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 RIBC1Q8N443 379 aaPredicted RBP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 CENPTQ96BT3 561 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 IFT43Q96FT9 208 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 TMEM169Q96HH4 297 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 OLFM3Q96PB7 478 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 APOL5Q9BWW9 433 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 LRRC40Q9H9A6 602 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 ARL8BQ9NVJ2 186 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 ZNF638Q14966 1978 aaKnown RBP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 C9JVG2 144 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 E7ESA3 106 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 RAMP2O60895 175 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 HNRNPLP14866 589 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 NSUN2Q08J23 767 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 BHLHA9Q7RTU4 235 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 DENND1AQ8TEH3 1009 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 ESAMQ96AP7 390 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 WDR55Q9H6Y2 383 aaPredicted RBP12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 CATSPERBQ9H7T0 1116 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 FAM50BQ9Y247 325 aa12.13□□□□□ -0.47
TMEM38B-202ENST00000374692 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms