RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SERPINB8P50452 374 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 LDB1Q86U70 411 aaPredicted RBP17.36■□□□□ 0.37
RXRB-201ENST00000374680 TMEM135Q86UB9 458 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 SNX31Q8N9S9 440 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 TDRD5Q8NAT2 981 aaKnown RBP17.36■□□□□ 0.37
RXRB-201ENST00000374680 ZSCAN18Q8TBC5 510 aaPredicted RBP17.36■□□□□ 0.37
RXRB-201ENST00000374680 SMARCD1Q96GM5 515 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 TEKT5Q96M29 485 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 NAT9Q9BTE0 207 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 GBA3Q9H227 469 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 MKS1Q9NXB0 559 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 SOX13Q9UN79 622 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 A0A088AWK7 358 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 TMEM233B4DJY2 109 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 HHLA1C9JL84 531 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 LMNAP02545 664 aaKnown RBP17.36■□□□□ 0.37
RXRB-201ENST00000374680 AHSGP02765 367 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 COPAP53621 1224 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 PDCD2Q16342 344 aaPredicted RBP17.36■□□□□ 0.37
RXRB-201ENST00000374680 ACMSDQ8TDX5 336 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 NDNQ99608 321 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 CYP4F12Q9HCS2 524 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 CASS4Q9NQ75 786 aa17.36■□□□□ 0.37
RXRB-201ENST00000374680 EIF2B3Q9NR50 452 aaKnown RBP17.36■□□□□ 0.37
RXRB-201ENST00000374680 G3V2L1 256 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 MAP3K13O43283 966 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 BUD23O43709 281 aaKnown RBP17.35■□□□□ 0.37
RXRB-201ENST00000374680 MT-CO1P00395 513 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 JUNP05412 331 aaKnown RBP17.35■□□□□ 0.37
RXRB-201ENST00000374680 GNAT1P11488 350 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 GABRB3P28472 473 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 PLK1P53350 603 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 ARPP19P56211 112 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 SEMA3BQ13214 749 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 BLMHQ13867 455 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 BHLHA9Q7RTU4 235 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 ABI2Q9NYB9 513 aaPredicted RBP17.35■□□□□ 0.37
RXRB-201ENST00000374680 PADI3Q9ULW8 664 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 ENO4A6NNW6 628 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 C9IYK1 514 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 MAP3K7O43318 606 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 PAGE1O75459 146 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 TOMM70O94826 608 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 HMBSP08397 361 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 ANPEPP15144 967 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 GPR15P49685 360 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 GJA9P57773 515 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 RABGAP1LQ5R372 815 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 LPCAT4Q643R3 524 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 IZUMO2Q6UXV1 221 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 C14orf80Q86SX3 495 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 CCNJLQ8IV13 435 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 TRPV1Q8NER1 839 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 KLHL5Q96PQ7 755 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 ARHGAP39Q9C0H5 1083 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 SLC39A8Q9C0K1 460 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 CHST12Q9NRB3 414 aa17.35■□□□□ 0.37
RXRB-201ENST00000374680 FBXO21O94952 628 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 PIGNO95427 931 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 SERPINB6P35237 376 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 CPOXP36551 454 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 CCNG1P51959 295 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 BTBD8Q5XKL5 378 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 ATPAF2Q8N5M1 289 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 CASP10Q92851 521 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 FCRL2Q96LA5 508 aaPredicted RBP17.34■□□□□ 0.37
RXRB-201ENST00000374680 LENG8Q96PV6 779 aaPredicted RBP17.34■□□□□ 0.37
RXRB-201ENST00000374680 ADAM2Q99965 735 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 ACE2Q9BYF1 805 aaPredicted RBP17.34■□□□□ 0.37
RXRB-201ENST00000374680 BRD8Q9H0E9 1235 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 SLC38A7Q9NVC3 462 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 RBM22Q9NW64 420 aaKnown RBP eCLIP17.34■□□□□ 0.37
RXRB-201ENST00000374680 STX18Q9P2W9 335 aaKnown RBP17.34■□□□□ 0.37
RXRB-201ENST00000374680 TRIM13O60858 407 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 SOAT2O75908 522 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 SMNDC1O75940 238 aaKnown RBP eCLIP17.34■□□□□ 0.37
RXRB-201ENST00000374680 IL1BP01584 269 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 GCKP35557 465 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 GRIA4P48058 902 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 CXCR3P49682 368 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 UPP1Q16831 310 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 DDR2Q16832 855 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 BNIPLQ7Z465 357 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 NXNL1Q96CM4 212 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 CDH9Q9ULB4 789 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 PRG3Q9Y2Y8 225 aaPredicted RBP17.34■□□□□ 0.37
RXRB-201ENST00000374680 TBX18O95935 607 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 TSPAN8P19075 237 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 PRPSAP1Q14558 356 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 ARL13AQ5H913 290 aaPredicted RBP17.34■□□□□ 0.37
RXRB-201ENST00000374680 CST9Q5W186 159 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 KCTD11Q693B1 232 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 CEP97Q8IW35 865 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 APBB2Q92870 758 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 CATSPER2Q96P56 530 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 MTF2Q9Y483 593 aaPredicted RBP17.34■□□□□ 0.37
RXRB-201ENST00000374680 TRPV2Q9Y5S1 764 aa17.34■□□□□ 0.37
RXRB-201ENST00000374680 ZNF195O14628 629 aa17.33■□□□□ 0.37
RXRB-201ENST00000374680 HNRNPLP14866 589 aaKnown RBP eCLIP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms