RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 GIT1Q9Y2X7 761 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 TSC2P49815 1807 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 FAM72CH0Y354 149 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 LYPLA1O75608 230 aaPredicted RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 TOP3BO95985 862 aaKnown RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 IDH3AP50213 366 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 COPAP53621 1224 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 KLC1Q07866 573 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 CDH17Q12864 832 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 LBRQ14739 615 aaKnown RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 TMCO4Q5TGY1 634 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 FAM72AQ5TYM5 149 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 PDPK2PQ6A1A2 396 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 FAM72DQ6L9T8 149 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 Q7L0L9 218 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 SERINC5Q86VE9 423 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 KCNMB4Q86W47 210 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 FAM72BQ86X60 149 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 METTL23Q86XA0 190 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 MYLK4Q86YV6 388 aaPredicted RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 CCDC117Q8IWD4 279 aaPredicted RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 JADE3Q92613 823 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 TEKT5Q96M29 485 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 THTPAQ9BU02 230 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 MLPHQ9BV36 600 aaPredicted RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 OSBPL2Q9H1P3 480 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 WDCPQ9H6R7 721 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 CSNK1G1Q9HCP0 422 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 FAM105AQ9NUU6 356 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 PIH1D1Q9NWS0 290 aaKnown RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 PRKAG2Q9UGJ0 569 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 NOD1Q9Y239 953 aa14.2□□□□□ -0.14
HMGCL-203ENST00000374490 AAR2Q9Y312 384 aaKnown RBP14.2□□□□□ -0.14
HMGCL-203ENST00000374490 A0A096LPK6 155 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 A6NHS1 94 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ARHGAP42A6NI28 874 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 HHLA1C9JL84 531 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 TRIM13O60858 407 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 SIN3BO75182 1162 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 TBX10O75333 385 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 HSPA4LO95757 839 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 USP17L7P0C7H9 530 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 NFKB1P19838 968 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ABL2P42684 1182 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 SESN3P58005 492 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 UBAP2LQ14157 1087 aaKnown RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 UGP2Q16851 508 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ANO4Q32M45 955 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CFAP157Q5JU67 520 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 C1orf146Q5VVC0 180 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 PM20D1Q6GTS8 502 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CAPRIN2Q6IMN6 1127 aaKnown RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 FSTL4Q6MZW2 842 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 RIPOR1Q6ZS17 1223 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ADGRG6Q86SQ4 1221 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 RNF169Q8NCN4 708 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ZMIZ2Q8NF64 920 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 URGCPQ8TCY9 931 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 MICAL1Q8TDZ2 1067 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 PCED1BQ96HM7 432 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 AGAP3Q96P47 875 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CDH19Q9H159 772 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 VCXQ9H320 206 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ARHGEF37A1IGU5 675 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CACNG3O60359 315 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CCNT2O60583 730 aaKnown RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CTSHP09668 335 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ODC1P11926 461 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 COL6A2P12110 1019 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CD68P34810 354 aaPredicted RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ASPHQ12797 758 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ITGA9Q13797 1035 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 PPM1JQ5JR12 505 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CCSAPQ6IQ19 270 aaPredicted RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ANO7Q6IWH7 933 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 CES3Q6UWW8 571 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 LZTR1Q8N653 840 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 NPWQ8N729 165 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 SCG3Q8WXD2 468 aaKnown RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 ZFP42Q96MM3 310 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 GPR22Q99680 433 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 KIFC1Q9BW19 673 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 C20orf96Q9NUD7 363 aaPredicted RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 SLC7A8Q9UHI5 535 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 DSEQ9UL01 958 aa14.19□□□□□ -0.14
HMGCL-203ENST00000374490 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.19□□□□□ -0.14
HMGCL-203ENST00000374490 COL4A4P53420 1690 aaPredicted RBP14.18□□□□□ -0.14
HMGCL-203ENST00000374490 MYBPHLA2RUH7 354 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 SLCO1B7G3V0H7 640 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 SLC22A2O15244 555 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 ANXA9O76027 345 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 SNUPNO95149 360 aaKnown RBP14.18□□□□□ -0.14
HMGCL-203ENST00000374490 ANPEPP15144 967 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 CCNCP24863 283 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 CPOXP36551 454 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 ATN1P54259 1190 aaPredicted RBP14.18□□□□□ -0.14
HMGCL-203ENST00000374490 ZBTB17Q13105 803 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
HMGCL-203ENST00000374490 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
HMGCL-203ENST00000374490 GSTA3Q16772 222 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms