RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 B3GALNT2Q8NCR0 500 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 FIG4Q92562 907 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 TAS2R13Q9NYV9 303 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 TAS2R1Q9NYW7 299 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 LSM7Q9UK45 103 aaKnown RBP17.66■□□□□ 0.42
PTPRU-202ENST00000373779 TMEM63AO94886 807 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 SERPINF2P08697 491 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 EP400NLQ6ZTU2 488 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 MAB21L3Q8N8X9 362 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 ZNF516Q92618 1163 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 BORCS6Q96GS4 357 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 MAGED4Q96JG8 741 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 B3GNT5Q9BYG0 378 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 MTF2Q9Y483 593 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-202ENST00000373779 HES2Q9Y543 173 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 C5orf58C9J3I9 102 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 SLC35B2Q8TB61 432 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 QKIQ96PU8 341 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPRU-202ENST00000373779 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 NEK3P51956 506 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 TCEAL1Q15170 157 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 ACSBG2Q5FVE4 666 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 OVOS1Q6IE37 1185 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 NIPA2Q8N8Q9 360 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 ADARB2Q9NS39 739 aaKnown RBP17.66■□□□□ 0.42
PTPRU-202ENST00000373779 WASF2Q9Y6W5 498 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 RAMP2O60895 175 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 HOXB8P17481 243 aaPredicted RBP17.65■□□□□ 0.42
PTPRU-202ENST00000373779 ATP1A4Q13733 1029 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 WSCD1Q658N2 575 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 CD101Q93033 1021 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 SERPINB11Q96P15 392 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 CLPBQ9H078 707 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 PTPRHQ9HD43 1115 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 CRYL1Q9Y2S2 319 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 MAFBQ9Y5Q3 323 aaPredicted RBP17.65■□□□□ 0.42
PTPRU-202ENST00000373779 MRPL42Q9Y6G3 142 aaKnown RBP17.65■□□□□ 0.42
PTPRU-202ENST00000373779 ADCYAP1R1P41586 468 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 CROCCP3Q8IVE0 287 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 NAT8LQ8N9F0 302 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 GTF2A2P52657 109 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 TBX4P57082 545 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 VAC14Q08AM6 782 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 TMEM86AQ8N2M4 240 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 OR56A4Q8NGH8 313 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 SENP8Q96LD8 212 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 OSBPL11Q9BXB4 747 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 WDR55Q9H6Y2 383 aaPredicted RBP17.65■□□□□ 0.42
PTPRU-202ENST00000373779 EXOSC4Q9NPD3 245 aaKnown RBP17.65■□□□□ 0.42
PTPRU-202ENST00000373779 ANAPC2Q9UJX6 822 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 CYBBP04839 570 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 LBPP18428 481 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 MPSTP25325 297 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 CLCN5P51795 746 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 C21orf59P57076 290 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 STRADAQ7RTN6 431 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 PATL1Q86TB9 770 aaKnown RBP17.65■□□□□ 0.42
PTPRU-202ENST00000373779 STK32CQ86UX6 486 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 DGCR14Q96DF8 476 aaKnown RBP17.65■□□□□ 0.42
PTPRU-202ENST00000373779 FOPNLQ96NB1 174 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 LMCD1Q9NZU5 365 aa17.65■□□□□ 0.42
PTPRU-202ENST00000373779 C1orf232A0A0U1RR37 186 aa17.64■□□□□ 0.42
PTPRU-202ENST00000373779 CAPN8A6NHC0 703 aa17.64■□□□□ 0.42
PTPRU-202ENST00000373779 FGF10O15520 208 aaPredicted RBP17.64■□□□□ 0.42
PTPRU-202ENST00000373779 SLC2A4P14672 509 aa17.64■□□□□ 0.42
PTPRU-202ENST00000373779 VAV1P15498 845 aa17.64■□□□□ 0.42
PTPRU-202ENST00000373779 ADORA2AP29274 412 aa17.64■□□□□ 0.42
PTPRU-202ENST00000373779 LIN52Q52LA3 116 aa17.64■□□□□ 0.42
PTPRU-202ENST00000373779 FAM9CQ8IZT9 166 aa17.64■□□□□ 0.42
PTPRU-202ENST00000373779 FAM120BQ96EK7 910 aaKnown RBP17.64■□□□□ 0.42
PTPRU-202ENST00000373779 KCTD15Q96SI1 283 aaPredicted RBP17.64■□□□□ 0.42
PTPRU-202ENST00000373779 SYNCRIPO60506 623 aaKnown RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 MAPK1P28482 360 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 GRM5P41594 1212 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 C1orf127Q8N9H9 656 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 LENG1Q96BZ8 264 aaPredicted RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 ACOX2Q99424 681 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 ABT1Q9ULW3 272 aaKnown RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 ZNF682O95780 498 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 DDX5P17844 614 aaKnown RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 CYP2C18P33260 490 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 CCNG1P51959 295 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 MRPS5P82675 430 aaKnown RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 IL5RAQ01344 420 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 CSTF3Q12996 717 aaKnown RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 VGLL4Q14135 290 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 ARHGEF6Q15052 776 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 LRRC52Q8N7C0 313 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 DCAKDQ8WVC6 231 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 PNPLA3Q9NST1 481 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 TMEM161AQ9NX61 479 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 MDM4O15151 490 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 WDR47O94967 919 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 C2P06681 752 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 CCT8P50990 548 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 RUNX1T1Q06455 604 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 SLC25A52Q3SY17 297 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 TRIM60Q495X7 471 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 FAM126BQ8IXS8 530 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms