RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ATP9BO43861 1147 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 NEK3P51956 506 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 BMPR2Q13873 1038 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 RAB33AQ14088 237 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 VEPH1Q14D04 833 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 CES3Q6UWW8 571 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 RASSF3Q86WH2 238 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 SP110Q9HB58 689 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 H0YHG0 523 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 COPEO14579 308 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 SNX3O60493 162 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 RAMP2O60895 175 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 MT-CYBP00156 380 aaPredicted RBP25.44■■□□□ 1.66
CTSA-203ENST00000372459 MAPKAPK2P49137 400 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 HARS2P49590 506 aaKnown RBP25.44■■□□□ 1.66
CTSA-203ENST00000372459 ITIH4Q14624 930 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 ZKSCAN8Q15776 578 aaPredicted RBP25.44■■□□□ 1.66
CTSA-203ENST00000372459 MROH9Q5TGP6 573 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 LRRC8CQ8TDW0 803 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 FCRL3Q96P31 734 aaPredicted RBP25.44■■□□□ 1.66
CTSA-203ENST00000372459 YME1L1Q96TA2 773 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 ZFATQ9P243 1243 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 SLC17A7Q9P2U7 560 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 ZNF212Q9UDV6 495 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 ACSL4O60488 711 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 RFPL1O75677 317 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 BAIAP3O94812 1187 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 GJB5O95377 273 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 PEX11BO96011 259 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 ADRA1DP25100 572 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 POLD3Q15054 466 aaPredicted RBP25.44■■□□□ 1.66
CTSA-203ENST00000372459 PARP15Q460N3 678 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 ANKRD20A4Q4UJ75 823 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 FBXW10Q5XX13 1052 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 PACS1Q6VY07 963 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 TIFABQ6ZNK6 161 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 NECAB2Q7Z6G3 386 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 ZNF354CQ86Y25 554 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 IPMKQ8NFU5 416 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 NSMCE1Q8WV22 266 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 TRMT2BQ96GJ1 504 aaKnown RBP25.44■■□□□ 1.66
CTSA-203ENST00000372459 IQCGQ9H095 443 aaKnown RBP25.44■■□□□ 1.66
CTSA-203ENST00000372459 SOX13Q9UN79 622 aa25.44■■□□□ 1.66
CTSA-203ENST00000372459 COCHO43405 550 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 ACRP10323 421 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 ALADP13716 330 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 OR1E1P30953 314 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 ELF1P32519 619 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 CCNFP41002 786 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 SLC11A2P49281 568 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 DNAJC3Q13217 504 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 TXNDC16Q9P2K2 825 aa25.43■■□□□ 1.66
CTSA-203ENST00000372459 HMX2A2RU54 273 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 J3KR12 359 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 PRRG1O14668 218 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 ERVK-10P10266 1014 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 TPH1P17752 444 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 PPM1AP35813 382 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 YBEYP58557 167 aaPredicted RBP25.42■■□□□ 1.66
CTSA-203ENST00000372459 C5orf22Q49AR2 442 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 MARC1Q5VT66 337 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 ICE2Q659A1 982 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 CIR1Q86X95 450 aaPredicted RBP25.42■■□□□ 1.66
CTSA-203ENST00000372459 LGI2Q8N0V4 545 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 PLD4Q96BZ4 506 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 GRAMD1AQ96CP6 724 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 PITPNM3Q9BZ71 974 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 VPS11Q9H270 941 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 ENTPD7Q9NQZ7 604 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 MRPL17Q9NRX2 175 aaKnown RBP25.42■■□□□ 1.66
CTSA-203ENST00000372459 MKS1Q9NXB0 559 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 ZCWPW2A0A1B0GU75 182 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 HNRNPH1P31943 449 aaKnown RBP25.42■■□□□ 1.66
CTSA-203ENST00000372459 PPP3CCP48454 512 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 PLD1Q13393 1074 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 LACTB2Q53H82 288 aaPredicted RBP25.42■■□□□ 1.66
CTSA-203ENST00000372459 PABPC5Q96DU9 382 aaKnown RBP25.42■■□□□ 1.66
CTSA-203ENST00000372459 SRPK1Q96SB4 655 aaKnown RBP25.42■■□□□ 1.66
CTSA-203ENST00000372459 FICDQ9BVA6 458 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 FSD1LQ9BXM9 530 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 SLC25A51Q9H1U9 297 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 RETREG1Q9H6L5 497 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 SLC17A6Q9P2U8 582 aa25.42■■□□□ 1.66
CTSA-203ENST00000372459 OAS1P00973 400 aaKnown RBP25.41■■□□□ 1.66
CTSA-203ENST00000372459 MPP3Q13368 585 aa25.41■■□□□ 1.66
CTSA-203ENST00000372459 PSMG2Q969U7 264 aa25.41■■□□□ 1.66
CTSA-203ENST00000372459 MFSD3Q96ES6 412 aa25.41■■□□□ 1.66
CTSA-203ENST00000372459 MYEOVQ96EZ4 313 aa25.41■■□□□ 1.66
CTSA-203ENST00000372459 CHRAC1Q9NRG0 131 aa25.41■■□□□ 1.66
CTSA-203ENST00000372459 USP15Q9Y4E8 981 aaPredicted RBP25.41■■□□□ 1.66
CTSA-203ENST00000372459 ADRA1AP35348 466 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 ETV4P43268 484 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 IL10RBQ08334 325 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 TWF1Q12792 350 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 SERINC3Q13530 473 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 CCDC117Q8IWD4 279 aaPredicted RBP25.4■■□□□ 1.66
CTSA-203ENST00000372459 AUTS2Q8WXX7 1259 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 FAM111AQ96PZ2 611 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 CPNE1Q99829 537 aa25.4■■□□□ 1.66
CTSA-203ENST00000372459 KIFC1Q9BW19 673 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms