RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 NDST2P52849 883 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 TMED2Q15363 201 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 SWT1Q5T5J6 900 aaKnown RBP18.84■□□□□ 0.61
VEGFA-206ENST00000372077 CCDC91Q7Z6B0 441 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 CPXM2Q8N436 756 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 CCDC89Q8N998 374 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 FAM71DQ8N9W8 422 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 CELF6Q96J87 481 aaKnown RBP18.84■□□□□ 0.61
VEGFA-206ENST00000372077 LGMNQ99538 433 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 SLC39A8Q9C0K1 460 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 CXorf56Q9H5V9 222 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 ANAPC5Q9UJX4 755 aa18.84■□□□□ 0.61
VEGFA-206ENST00000372077 PRAMEF12O95522 483 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 FSHRP23945 695 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 GARSP41250 739 aaKnown RBP18.83■□□□□ 0.61
VEGFA-206ENST00000372077 MMP13P45452 471 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 MAPKAPK2P49137 400 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 CDH4P55283 916 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 GAD2Q05329 585 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 PPIDQ08752 370 aaKnown RBP18.83■□□□□ 0.61
VEGFA-206ENST00000372077 CFAP52Q8N1V2 620 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 EIF1ADQ8N9N8 165 aaKnown RBP18.83■□□□□ 0.61
VEGFA-206ENST00000372077 RIN3Q8TB24 985 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 CCHCR1Q8TD31 782 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 APOL5Q9BWW9 433 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 S1PR5Q9H228 398 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 L3MBTL1Q9Y468 752 aa18.83■□□□□ 0.61
VEGFA-206ENST00000372077 TRDMT1O14717 391 aaKnown RBP18.83■□□□□ 0.6
VEGFA-206ENST00000372077 KCNN4O15554 427 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 VAV1P15498 845 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 SGSHP51688 502 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 KCNJ2P63252 427 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 ZNF33AQ06730 810 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 CBX2Q14781 532 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-206ENST00000372077 COL19A1Q14993 1142 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 ZNF77Q15935 545 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 CHST9Q7L1S5 443 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 TFAP2DQ7Z6R9 452 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 CIR1Q86X95 450 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-206ENST00000372077 ARID3BQ8IVW6 561 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-206ENST00000372077 BBS7Q8IWZ6 715 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 ART4Q93070 314 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 SAMD15Q9P1V8 674 aa18.83■□□□□ 0.6
VEGFA-206ENST00000372077 ZNF189O75820 626 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 EIF3BP55884 814 aaKnown RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 RPS24P62847 133 aaKnown RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 USP4Q13107 963 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 TTC39BQ5VTQ0 682 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 CCT6BQ92526 530 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 TSGA13Q96PP4 275 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 TPX2Q9ULW0 747 aaKnown RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 A6NNZ2 444 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 SCAMP3O14828 347 aaKnown RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 UBOX5O94941 541 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 BRAFP15056 766 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 TUBB8Q3ZCM7 444 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 EMC10Q5UCC4 262 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 LRRC49Q8IUZ0 686 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 ANKMY2Q8IV38 441 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 NPAS3Q8IXF0 933 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 C4orf33Q8N1A6 199 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 HTR3CQ8WXA8 447 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■■■■■ 46.3
VEGFA-206ENST00000372077 WDR91A4D1P6 747 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 TSPAN3O60637 253 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 CLDN11O75508 207 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 NUDT17P0C025 328 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 HEATR6Q6AI08 1181 aaKnown RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 CCNYQ8ND76 341 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 ZSCAN18Q8TBC5 510 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-206ENST00000372077 CDH22Q9UJ99 828 aa18.82■□□□□ 0.6
VEGFA-206ENST00000372077 NUP210Q8TEM1 1887 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-206ENST00000372077 C5orf60A6NFR6 353 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 SOX1O00570 391 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-206ENST00000372077 TBX10O75333 385 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 RPL22P35268 128 aaKnown RBP18.81■□□□□ 0.6
VEGFA-206ENST00000372077 P3H1Q32P28 736 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 C6orf118Q5T5N4 469 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 P2RY11Q96G91 374 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 KLF6Q99612 283 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-206ENST00000372077 WHRNQ9P202 907 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 NUP205Q92621 2012 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 A0A1B0GVM2 712 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 TCAF2A6NFQ2 919 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 CCT8L1PA6NM43 557 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 YBEYP58557 167 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-206ENST00000372077 DLX2Q07687 328 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-206ENST00000372077 AP1B1Q10567 949 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 HOMEZQ8IX15 550 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 KIAA1958Q8N8K9 716 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 TMA16Q96EY4 203 aaKnown RBP18.81■□□□□ 0.6
VEGFA-206ENST00000372077 SUFUQ9UMX1 484 aa18.81■□□□□ 0.6
VEGFA-206ENST00000372077 GCATO75600 419 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 CCNCP24863 283 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 OR1E1P30953 314 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 IZUMO3Q5VZ72 239 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 PARP9Q8IXQ6 854 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 HJURPQ8NCD3 748 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-206ENST00000372077 FGF13Q92913 245 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms