RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 ACADVLP49748 655 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 DEUP1Q05D60 604 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 TPD52L1Q16890 204 aaPredicted RBP13.48□□□□□ -0.25
RPF1-201ENST00000370654 FAM102AQ5T9C2 384 aaPredicted RBP13.48□□□□□ -0.25
RPF1-201ENST00000370654 SFMBT2Q5VUG0 894 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
RPF1-201ENST00000370654 TRIM69Q86WT6 500 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 MFSD2AQ8NA29 543 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 SLC20A1Q8WUM9 679 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 CPA5Q8WXQ8 436 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 TSC1Q92574 1164 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 C18orf8Q96DM3 657 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 PGAP3Q96FM1 320 aaPredicted RBP13.48□□□□□ -0.25
RPF1-201ENST00000370654 TMEM59LQ9UK28 342 aa13.48□□□□□ -0.25
RPF1-201ENST00000370654 ZFR2Q9UPR6 939 aaKnown RBP13.48□□□□□ -0.25
RPF1-201ENST00000370654 IGLV3-10A0A075B6K4 115 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 E9PAM4 449 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 TRIM38O00635 465 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 EPHB6O15197 1021 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 SLC31A1O15431 190 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 SLC7A4O43246 635 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 RNGTTO60942 597 aaKnown RBP13.47□□□□□ -0.25
RPF1-201ENST00000370654 SRGAP2O75044 1071 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 ZMPSTE24O75844 475 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 GJB6O95452 261 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 ZNF18P17022 549 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 RXRGP48443 463 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 OXCT1P55809 520 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 SLC25A52Q3SY17 297 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 BRMS1LQ5PSV4 323 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 FAM46CQ5VWP2 391 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 NAA35Q5VZE5 725 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 PDZD3Q86UT5 571 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 GALNT15Q8N3T1 639 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 SLC25A45Q8N413 288 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 EMC1Q8N766 993 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 ATP11CQ8NB49 1132 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 TMEM145Q8NBT3 493 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 TMEM35BQ8NCS4 154 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 KDM4CQ9H3R0 1056 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 ERVMER34-1Q9H9K5 563 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 UCKL1Q9NWZ5 548 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 TAB2Q9NYJ8 693 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 ACACAQ13085 2346 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 NBEAQ8NFP9 2946 aa13.47□□□□□ -0.25
RPF1-201ENST00000370654 URB1O60287 2271 aaKnown RBP13.46□□□□□ -0.25
RPF1-201ENST00000370654 A0A1W2PQU0 124 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 C1QTNF3-AMACRE9PGA6 284 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 KPNA3O00505 521 aaPredicted RBP13.46□□□□□ -0.25
RPF1-201ENST00000370654 ALOX15BO15296 676 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 CD160O95971 181 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 UCHL3P15374 230 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 CHRNB2P17787 502 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 CLDN2P57739 230 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 NOMO3P69849 1222 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 FGL2Q14314 439 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 ZNF284Q2VY69 593 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 SOWAHCQ53LP3 525 aaPredicted RBP13.46□□□□□ -0.25
RPF1-201ENST00000370654 ARSIQ5FYB1 569 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 SEL1L3Q68CR1 1132 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 KDM7AQ6ZMT4 941 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 DPY19L3Q6ZPD9 716 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 DSG4Q86SJ6 1040 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 ERICH1Q86X53 443 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 FAM131BQ86XD5 332 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 ZDHHC17Q8IUH5 632 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 DCAF4L2Q8NA75 395 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 VOPP1Q96AW1 172 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 SKA1Q96BD8 255 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 C1orf74Q96LT6 269 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 GANQ9H2C0 597 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 PDCL3Q9H2J4 239 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 NDFIP2Q9NV92 336 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 DKK4Q9UBT3 224 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 NOCTQ9UK39 431 aaKnown RBP13.46□□□□□ -0.25
RPF1-201ENST00000370654 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 DOCK4Q8N1I0 1966 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 ITPR1Q14643 2758 aa13.46□□□□□ -0.25
RPF1-201ENST00000370654 F8VZ95 297 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 RFPL3O75679 317 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 GIMD1P0DJR0 217 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 MYF5P13349 255 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 ERCC5P28715 1186 aaPredicted RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 ARRB1P49407 418 aaPredicted RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 BPIFB4P59827 614 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 KRT83P78385 493 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 ARF5P84085 180 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 ATP11AP98196 1134 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 TARDBPQ13148 414 aaKnown RBP eCLIP13.45□□□□□ -0.26
RPF1-201ENST00000370654 STAT4Q14765 748 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 INAVAQ3KP66 663 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SLC45A4Q5BKX6 768 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 C22orf39Q6P5X5 142 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FBXL19Q6PCT2 694 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SETD3Q86TU7 594 aaPredicted RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 TMPRSS12Q86WS5 348 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 JOSD2Q8TAC2 188 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms