RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TSHRP16473 764 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 CCDC157Q569K6 752 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 FAM45BPQ6NSW5 357 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 FAM45AQ8TCE6 357 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 SUSD6Q92537 303 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 GLMNQ92990 594 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 MRPL45Q9BRJ2 306 aaKnown RBP19.93■□□□□ 0.78
LMO4-202ENST00000370544 MLPHQ9BV36 600 aaPredicted RBP19.93■□□□□ 0.78
LMO4-202ENST00000370544 RAD18Q9NS91 495 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 TNPO3Q9Y5L0 923 aaKnown RBP19.93■□□□□ 0.78
LMO4-202ENST00000370544 COL1A2P08123 1366 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 ABHD2P08910 425 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 UNC5AQ6ZN44 842 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 TMEM132CQ8N3T6 1108 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 PPP1R16AQ96I34 528 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 ZNF839A8K0R7 811 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 CLDN5O00501 218 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 MAPK9P45984 424 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 SNRPD1P62314 119 aaKnown RBP19.93■□□□□ 0.78
LMO4-202ENST00000370544 GDPD5Q8WTR4 605 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 INPP4AQ96PE3 977 aaPredicted RBP19.93■□□□□ 0.78
LMO4-202ENST00000370544 SAR1AQ9NR31 198 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 CAB39Q9Y376 341 aaPredicted RBP19.93■□□□□ 0.78
LMO4-202ENST00000370544 CSH1P0DML2 217 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 CSH2P0DML3 217 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 GPR15P49685 360 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 AUHQ13825 339 aaKnown RBP19.93■□□□□ 0.78
LMO4-202ENST00000370544 GRIN3AQ8TCU5 1115 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 BDH2Q9BUT1 245 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 KLHL20Q9Y2M5 609 aa19.93■□□□□ 0.78
LMO4-202ENST00000370544 BANF1O75531 89 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 PRKAR2AP13861 404 aaKnown RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 ARF4P18085 180 aaPredicted RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 SOX6P35712 828 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 MATKP42679 507 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 TAS2R40P59535 323 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 FKBP1BP68106 108 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 FRG1Q14331 258 aaKnown RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 LRRC49Q8IUZ0 686 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 STAG3L4Q8TBR4 150 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 SMAD5Q99717 465 aaKnown RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 NLNQ9BYT8 704 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 PRDM12Q9H4Q4 367 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 DERAQ9Y315 318 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 FAM220BPB1ANY3 271 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 ERBB2P04626 1255 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 HDCP19113 662 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 ME2P23368 584 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 SERPINB1P30740 379 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 CHKAP35790 457 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 SLC34A1Q06495 639 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 FAM228AQ86W67 206 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 GPR20Q99678 358 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 DUSP16Q9BY84 665 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 TBL1XO60907 577 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 CCL23P55773 120 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 IL5RAQ01344 420 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 PFKFB4Q16877 469 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 USP41Q3LFD5 358 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 STXBP5Q5T5C0 1151 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 DNAJC14Q6Y2X3 702 aaPredicted RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 TRAPPC5Q8IUR0 188 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 NKAPQ8N5F7 415 aaKnown RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 CKAP2Q8WWK9 683 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 MMADHCQ9H3L0 296 aaPredicted RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 GNPTGQ9UJJ9 305 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 SLC27A5Q9Y2P5 690 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 SLC9A3R1O14745 358 aaPredicted RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 KRT20P35900 424 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 HPCAL1P37235 193 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 IRX1P78414 480 aaPredicted RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.92■□□□□ 0.78
LMO4-202ENST00000370544 ZCCHC8Q6NZY4 707 aaKnown RBP19.92■□□□□ 0.78
LMO4-202ENST00000370544 ASAH2Q9NR71 780 aa19.92■□□□□ 0.78
LMO4-202ENST00000370544 BUD23O43709 281 aaKnown RBP19.91■□□□□ 0.78
LMO4-202ENST00000370544 CYP2A13Q16696 494 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 AFTPHQ6ULP2 937 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 FAM35AQ86V20 835 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 EID3Q8N140 333 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 RNF148Q8N7C7 305 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 ERLEC1Q96DZ1 483 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 ZMAT2Q96NC0 199 aaKnown RBP19.91■□□□□ 0.78
LMO4-202ENST00000370544 CDRT15Q96T59 188 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.91■□□□□ 0.783e-6■■■□□ 15.6
LMO4-202ENST00000370544 ARMC7Q9H6L4 198 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 ASB8Q9H765 288 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 ZC4H2Q9NQZ6 224 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 ACTL7BQ9Y614 415 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 RGS5O15539 181 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 PDE5AO76074 875 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 GRK4P32298 578 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 CLCN5P51795 746 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 COL9A3Q14050 684 aaPredicted RBP19.91■□□□□ 0.78
LMO4-202ENST00000370544 C9orf57Q5W0N0 161 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 TERB1Q8NA31 727 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 TRPC4APQ8TEL6 797 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 NXF3Q9H4D5 531 aaKnown RBP19.91■□□□□ 0.78
LMO4-202ENST00000370544 MAP2K7O14733 419 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 BMP10O95393 424 aa19.91■□□□□ 0.78
LMO4-202ENST00000370544 CLPTM1O96005 669 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms