RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GBE1Q04446 702 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 ZNF33AQ06730 810 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 RFTN1Q14699 578 aaPredicted RBP15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 STARD3Q14849 445 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 CRY1Q16526 586 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 SEL1L2Q5TEA6 688 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 DCAF12L1Q5VU92 463 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 ATPAF2Q8N5M1 289 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 CCDC33Q8N5R6 958 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 ATP11CQ8NB49 1132 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 ZNF599Q96NL3 588 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 BRD8Q9H0E9 1235 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 SP110Q9HB58 689 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 PDFQ9HBH1 243 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 DTLQ9NZJ0 730 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 SLCO3A1Q9UIG8 710 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 ZKSCAN5Q9Y2L8 839 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 CHD5Q8TDI0 1954 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 EDDM13A0A1B0GTR0 161 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 TARSL2A2RTX5 802 aaKnown RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 ANTXRLA6NF34 631 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 APOC4-APOC2K7ER74 178 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 KCNK3O14649 394 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 SYNCRIPO60506 623 aaKnown RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 APOC2P02655 101 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 EPHX1P07099 455 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 SRCP12931 536 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 GARSP41250 739 aaKnown RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 NUMBP49757 651 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 DYNLT1P63172 113 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 ZNF211Q13398 564 aaPredicted RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 HNRNPA1L2Q32P51 320 aaKnown RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 GLIPR1L2Q4G1C9 344 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 TMCO4Q5TGY1 634 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 TIGD7Q6NT04 549 aaPredicted RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 PKN3Q6P5Z2 889 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 LINGO4Q6UY18 593 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 DTWD2Q8NBA8 298 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 P3H4Q92791 437 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 FATE1Q969F0 183 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 HEMGNQ9BXL5 484 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 FBRSQ9HAH7 460 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 POLMQ9NP87 494 aaPredicted RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 ZDHHC4Q9NPG8 344 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 SPATA6Q9NWH7 488 aaPredicted RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 UBA2Q9UBT2 640 aaPredicted RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 HEY1Q9Y5J3 304 aa15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 MUC22E2RYF6 1773 aaPredicted RBP15.85■□□□□ 0.13
PRPF38B-202ENST00000370022 WASH3PC4AMC7 463 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 PPP1R12AO14974 1030 aaPredicted RBP15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 MAFKO60675 156 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 MT-CO1P00395 513 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 PRKCHP24723 683 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 GNG11P61952 73 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 PDK1Q15118 436 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 DLG2Q15700 870 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 ACCSLQ4AC99 568 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 CCDC181Q5TID7 509 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 CAMKK1Q8N5S9 505 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 FRS2Q8WU20 508 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 NSMCE1Q8WV22 266 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 ISG20Q96AZ6 181 aaKnown RBP15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 HDAC11Q96DB2 347 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 CCDC114Q96M63 670 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 TSGA13Q96PP4 275 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 TRIOO75962 3097 aa15.84■□□□□ 0.13
PRPF38B-202ENST00000370022 A0A1W2PQF6 199 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 TTC34A8MYJ7 566 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 J3KR12 359 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 ENC1O14682 589 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 LAMTOR5O43504 91 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 CD160O95971 181 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 CCNCP24863 283 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 WASP42768 502 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 ADCY2Q08462 1091 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 SLC10A2Q12908 348 aaPredicted RBP15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 CAMK2GQ13555 558 aaPredicted RBP15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 C1orf210Q8IVY1 113 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 TP53INP2Q8IXH6 220 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 PLPP6Q8IY26 295 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 PCDH20Q8N6Y1 951 aaKnown RBP15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 TTC13Q8NBP0 860 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 OLFM3Q96PB7 478 aa15.83■□□□□ 0.13
PRPF38B-202ENST00000370022 ZBTB24O43167 697 aaPredicted RBP15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 ALDH1A2O94788 518 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 HLA-EP13747 358 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 HOXA6P31267 233 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 PPIDQ08752 370 aaKnown RBP15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 KLF1Q13351 362 aaPredicted RBP15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 LLGL1Q15334 1064 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 AADACL2Q6P093 401 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 C22orf39Q6P5X5 142 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 ARHGAP36Q6ZRI8 547 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 BBS5Q8N3I7 341 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 NETO2Q8NC67 525 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 PTPRN2Q92932 1015 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 PBKQ96KB5 322 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 LRFN3Q9BTN0 628 aa15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 PRMT8Q9NR22 394 aaPredicted RBP15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 HAUS2Q9NVX0 235 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms