RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 GNA12Q03113 381 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 IL10RBQ08334 325 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 SLC10A7Q0GE19 358 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
PHGDH-202ENST00000369409 TEAD2Q15562 447 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 SLC5A9Q2M3M2 681 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 TTC39BQ5VTQ0 682 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-202ENST00000369409 LEKR1Q6ZMV7 388 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 OR7D4Q8NG98 312 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 OR52K1Q8NGK4 314 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 FATE1Q969F0 183 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 TLCD1Q96CP7 247 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
PHGDH-202ENST00000369409 NT5MQ9NPB1 228 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 RABGEF1Q9UJ41 708 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 LAMA3Q16787 3333 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 POC1B-GALNT4F8VUJ3 575 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 CACNG3O60359 315 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 TBL1XO60907 577 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 XYLBO75191 536 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 FGF19O95750 216 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 MGAT1P26572 445 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 HOXD9P28356 352 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 RENBPP51606 427 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 NTHL1P78549 312 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 CRADDP78560 199 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 ZNF177Q13360 481 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 PPP2R2DQ66LE6 453 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 NSMCE1Q8WV22 266 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 ARNTL2Q8WYA1 636 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 FCRL5Q96RD9 977 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 EBNA1BP2Q99848 306 aaKnown RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 APOL2Q9BQE5 337 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 MAGEH1Q9H213 219 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 LRRC40Q9H9A6 602 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 PDE4DIPQ5VU43 2346 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 TCRBV9S1A1TA0A576 114 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 PRAMEF11O60813 436 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 CDH16O75309 829 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 MOSPD3O75425 235 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 SPAG6O75602 509 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 PFKLP17858 780 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 GCAP28676 217 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 MARC1Q5VT66 337 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 IL31Q6EBC2 164 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 CASC4Q6P4E1 433 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 BBS7Q8IWZ6 715 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 HJURPQ8NCD3 748 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 MRRFQ96E11 262 aaKnown RBP17.12■□□□□ 0.33
PHGDH-202ENST00000369409 STAMBPL1Q96FJ0 436 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 ACSS3Q9H6R3 686 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 SYBUQ9NX95 663 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 TBK1Q9UHD2 729 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 ADAM21Q9UKJ8 722 aa17.12■□□□□ 0.33
PHGDH-202ENST00000369409 TYW5A2RUC4 315 aaKnown RBP17.11■□□□□ 0.33
PHGDH-202ENST00000369409 LEFTY2O00292 366 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 PIAS1O75925 651 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 ANXA9O76027 345 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 AGTP01019 485 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 ETFBP38117 255 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 MMP13P45452 471 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 IFNAR2P48551 515 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 MAXP61244 160 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 TMED2Q15363 201 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 ARHGAP15Q53QZ3 475 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 COL13A1Q5TAT6 717 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-202ENST00000369409 CXorf57Q6NSI4 855 aaKnown RBP17.11■□□□□ 0.33
PHGDH-202ENST00000369409 UNC5AQ6ZN44 842 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 GRASPQ7Z6J2 395 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-202ENST00000369409 FAM217AQ8IXS0 508 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 KLHDC8BQ8IXV7 354 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 IPMKQ8NFU5 416 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 NUP210Q8TEM1 1887 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-202ENST00000369409 BHMTQ93088 406 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 SPON2Q9BUD6 331 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 STMN4Q9H169 189 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-202ENST00000369409 PDFQ9HBH1 243 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 PLAC1Q9HBJ0 212 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 CASS4Q9NQ75 786 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 ZDHHC7Q9NXF8 308 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 LGALS13Q9UHV8 139 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 ARHGAP26Q9UNA1 814 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
PHGDH-202ENST00000369409 AAR2Q9Y312 384 aaKnown RBP17.11■□□□□ 0.33
PHGDH-202ENST00000369409 SDR42E2A6NKP2 422 aa17.1■□□□□ 0.33
PHGDH-202ENST00000369409 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
PHGDH-202ENST00000369409 AVPR1AP37288 418 aa17.1■□□□□ 0.33
PHGDH-202ENST00000369409 ATP1A2P50993 1020 aa17.1■□□□□ 0.33
PHGDH-202ENST00000369409 LBRQ14739 615 aaKnown RBP17.1■□□□□ 0.33
PHGDH-202ENST00000369409 KLHL38Q2WGJ6 581 aa17.1■□□□□ 0.33
PHGDH-202ENST00000369409 TMCO4Q5TGY1 634 aa17.1■□□□□ 0.33
PHGDH-202ENST00000369409 NAPEPLDQ6IQ20 393 aa17.1■□□□□ 0.33
PHGDH-202ENST00000369409 HTR3DQ70Z44 454 aa17.1■□□□□ 0.33
PHGDH-202ENST00000369409 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-202ENST00000369409 CMTM8Q8IZV2 173 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms