RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 MTAPQ13126 283 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 AASDHPPTQ9NRN7 309 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CHST7Q9NS84 486 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 MRGBPQ9NV56 204 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 PEX11AO75192 247 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 FAM171BQ6P995 826 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 ZNF518BQ9C0D4 1074 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
SNX27-202ENST00000368841 EML1O00423 815 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 FFAR2O15552 330 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 HIST1H2ABP04908 130 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 NYAP1Q6ZVC0 841 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 HIST3H2AQ7L7L0 130 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 HIST1H2ACQ93077 130 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 APOPT1Q96IL0 206 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 FEM1CQ96JP0 617 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 A0A0U1RQJ8 604 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 MFN2O95140 757 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 IL1BP01584 269 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 PROCP04070 461 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 PIK3R1P27986 724 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 S100A3P33764 101 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 SLC9A7Q96T83 725 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 SLITRK2Q9H156 845 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 CTNNB1P35222 781 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 TRAF3Q13114 568 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 CXCL17Q6UXB2 119 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 BTBD10Q9BSF8 475 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 MYBPC1Q00872 1141 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 SLC6A3Q01959 620 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 PIGKQ92643 395 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 TP53INP1Q96A56 240 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 PCDH9Q9HC56 1237 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 TRPV2Q9Y5S1 764 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 AP3D1O14617 1153 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 CLOCKO15516 846 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 IL6P05231 212 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 CRABP2P29373 138 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 UBAP2LQ14157 1087 aaKnown RBP18.41■□□□□ 0.54
SNX27-202ENST00000368841 BPIFB6Q8NFQ5 453 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 MAGEE2Q8TD90 523 aaPredicted RBP18.41■□□□□ 0.54
SNX27-202ENST00000368841 SERPINB11Q96P15 392 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 GINS4Q9BRT9 223 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 KANSL3Q9P2N6 904 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 CLEC4AQ9UMR7 237 aa18.41■□□□□ 0.54
SNX27-202ENST00000368841 CNTNAP4Q9C0A0 1308 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 TEX28O15482 410 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 CYP4B1P13584 511 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 RETSATQ6NUM9 610 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 ASB8Q9H765 288 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 ANKZF1Q9H8Y5 726 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 SLC12A4Q9UP95 1085 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 SERPINE1P05121 402 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 TNFSF9P41273 254 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 CRTC3Q6UUV7 619 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 DNAJB14Q8TBM8 379 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 FUT8Q9BYC5 575 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 PCDHAC2Q9Y5I4 1007 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 RPL4P36578 427 aaKnown RBP18.4■□□□□ 0.54
SNX27-202ENST00000368841 IDH2P48735 452 aaKnown RBP18.4■□□□□ 0.54
SNX27-202ENST00000368841 DMGDHQ9UI17 866 aaKnown RBP18.4■□□□□ 0.54
SNX27-202ENST00000368841 RABGEF1Q9UJ41 708 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 RHAGQ02094 409 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 GCNT7Q6ZNI0 430 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 RTL3Q8N8U3 475 aaKnown RBP18.4■□□□□ 0.54
SNX27-202ENST00000368841 CYP3A43Q9HB55 503 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 BTBD7Q9P203 1132 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 SHMT1P34896 483 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 WDR93Q6P2C0 686 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 AGMOQ6ZNB7 445 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 SELENOMQ8WWX9 145 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 REXO5Q96IC2 774 aaKnown RBP18.4■□□□□ 0.54
SNX27-202ENST00000368841 PWWP2AQ96N64 755 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 TRIT1Q9H3H1 467 aaKnown RBP18.4■□□□□ 0.54
SNX27-202ENST00000368841 ETNK2Q9NVF9 386 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 ANGPT4Q9Y264 503 aa18.4■□□□□ 0.54
SNX27-202ENST00000368841 TRBV23OR9-2A0A075B6M9 112 aa18.39■□□□□ 0.54
SNX27-202ENST00000368841 KHDRBS3O75525 346 aaKnown RBP18.39■□□□□ 0.54
SNX27-202ENST00000368841 TCEA3O75764 348 aa18.39■□□□□ 0.54
SNX27-202ENST00000368841 MAD2L1Q13257 205 aaPredicted RBP18.39■□□□□ 0.54
SNX27-202ENST00000368841 C1orf50Q9BV19 199 aa18.39■□□□□ 0.54
SNX27-202ENST00000368841 XYLBO75191 536 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 ZBTB11O95625 1053 aaPredicted RBP18.39■□□□□ 0.53
SNX27-202ENST00000368841 SHBGP04278 402 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 LINC00032P0C843 101 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 GLIS3Q8NEA6 775 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 CERS4Q9HA82 394 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 EHD3Q9NZN3 535 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 PCDHA3Q9Y5H8 950 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 MYPNQ86TC9 1320 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 LDLRP01130 860 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 NTSP30990 170 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 GP5P40197 560 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 RAD23AP54725 363 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 RASAL3Q86YV0 1011 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 ZNF75CPQ92670 426 aaPredicted RBP18.39■□□□□ 0.53
SNX27-202ENST00000368841 LRRC39Q96DD0 335 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 BDH2Q9BUT1 245 aa18.39■□□□□ 0.53
SNX27-202ENST00000368841 DDX4Q9NQI0 724 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms