RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SFSWAPQ12872 951 aaKnown RBP19.38■□□□□ 0.69
CKS1B-203ENST00000368439 TP53BP1Q12888 1972 aaPredicted RBP19.38■□□□□ 0.69
CKS1B-203ENST00000368439 RWDD4Q6NW29 188 aaKnown RBP19.38■□□□□ 0.69
CKS1B-203ENST00000368439 SCYL2Q6P3W7 929 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 LRSAM1Q6UWE0 723 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 HDDC3Q8N4P3 179 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 ATP11CQ8NB49 1132 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 OR2A12Q8NGT7 310 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 GANCQ8TET4 914 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 CPLX3Q8WVH0 158 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 ARHGEF2Q92974 986 aaKnown RBP19.38■□□□□ 0.69
CKS1B-203ENST00000368439 OMDQ99983 421 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 SPON2Q9BUD6 331 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 DOCK9Q9BZ29 2069 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 MIR1-1HGQ9H1L0 117 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 ATP13A1Q9HD20 1204 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 OSGEPQ9NPF4 335 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 CNOT8Q9UFF9 292 aaKnown RBP19.38■□□□□ 0.69
CKS1B-203ENST00000368439 DNAI1Q9UI46 699 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 BZW2Q9Y6E2 419 aaKnown RBP19.38■□□□□ 0.69
CKS1B-203ENST00000368439 CXorf51AA0A1B0GTR3 108 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 RNF103O00237 685 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 CBX4O00257 560 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 PLK4O00444 970 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 BCAT2O15382 392 aaPredicted RBP19.37■□□□□ 0.69
CKS1B-203ENST00000368439 GJB3O75712 270 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 SERPING1P05155 500 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 EFHC2Q5JST6 749 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 DAB2IPQ5VWQ8 1189 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 KIAA0895LQ68EN5 471 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 C22orf39Q6P5X5 142 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 NCEH1Q6PIU2 408 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 OR2I1PQ8NGU4 316 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 PIP4K2CQ8TBX8 421 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 FNIP1Q8TF40 1166 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 ZNF653Q96CK0 615 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 NOL6Q9H6R4 1146 aaKnown RBP19.37■□□□□ 0.69
CKS1B-203ENST00000368439 EBF2Q9HAK2 575 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 ACTL7AQ9Y615 435 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 TMEM131Q92545 1883 aa19.37■□□□□ 0.69
CKS1B-203ENST00000368439 KNL1Q8NG31 2342 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 FSBPO95073 299 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 SYPP08247 313 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 PSMA2P25787 234 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 CASP14P31944 242 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 SERPINH1P50454 418 aaKnown RBP19.36■□□□□ 0.69
CKS1B-203ENST00000368439 ADPRHP54922 357 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 SLC20A2Q08357 652 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 GRIK2Q13002 908 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 TDRD12Q587J7 1177 aaKnown RBP19.36■□□□□ 0.69
CKS1B-203ENST00000368439 RETSATQ6NUM9 610 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 CYP4V2Q6ZWL3 525 aaPredicted RBP19.36■□□□□ 0.69
CKS1B-203ENST00000368439 DSG4Q86SJ6 1040 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 MINDY1Q8N5J2 469 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 RTL3Q8N8U3 475 aaKnown RBP19.36■□□□□ 0.69
CKS1B-203ENST00000368439 CHST14Q8NCH0 376 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 OR2T34Q8NGX1 318 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 PEBP4Q96S96 227 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 GTPBP2Q9BX10 602 aaKnown RBP19.36■□□□□ 0.69
CKS1B-203ENST00000368439 MAGEH1Q9H213 219 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 TSPY26PQ9H489 355 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 NENFQ9UMX5 172 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 LUC7L2Q9Y383 392 aaKnown RBP19.36■□□□□ 0.69
CKS1B-203ENST00000368439 PCNX2A6NKB5 2137 aa19.36■□□□□ 0.69
CKS1B-203ENST00000368439 WASH4PA8MWX3 477 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 KCNK5O95279 499 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 MYBL1P10243 752 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 CD27P26842 260 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 EPHB2P29323 1055 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 HNRNPH3P31942 346 aaKnown RBP19.35■□□□□ 0.69
CKS1B-203ENST00000368439 CHRNA3P32297 505 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 CA9Q16790 459 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 UAP1L1Q3KQV9 507 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 AGBL4Q5VU57 503 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 FAM46CQ5VWP2 391 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.35■□□□□ 0.69
CKS1B-203ENST00000368439 SNX19Q92543 992 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 TRIM11Q96F44 468 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 CEP44Q9C0F1 390 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 TNKS2Q9H2K2 1166 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 TM9SF3Q9HD45 589 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 DNAAF2Q9NVR5 837 aaKnown RBP19.35■□□□□ 0.69
CKS1B-203ENST00000368439 GPATCH2LQ9NWQ4 482 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 SCINQ9Y6U3 715 aa19.35■□□□□ 0.69
CKS1B-203ENST00000368439 A0A087X0T9 212 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 A0A1W2PPC4 97 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 FAM47DPA6NHR8 397 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 LRRC72A6NJI9 287 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 SLC7A4O43246 635 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 PLRG1O43660 514 aaKnown RBP19.34■□□□□ 0.69
CKS1B-203ENST00000368439 CREB3O43889 395 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 BNIP3LO60238 219 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 ADRB1P08588 477 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 FAM228BP0C875 321 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 ETFBP38117 255 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 CCR5P51681 352 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 CNTN1Q12860 1018 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 NFKBIBQ15653 356 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 DPY19L3Q6ZPD9 716 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms