RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ASAH2Q9NR71 780 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 MYO9BQ13459 2157 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 STAU1O95793 577 aaKnown RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 SLC2A4P14672 509 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 FECHP22830 423 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CDK7P50613 346 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 TBL3Q12788 808 aaKnown RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 NAB1Q13506 487 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 SH3PXD2AQ5TCZ1 1133 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CMC1Q7Z7K0 106 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 SYTL1Q8IYJ3 562 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 TNS4Q8IZW8 715 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 TMEM199Q8N511 208 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CCDC185Q8N715 623 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 MLPHQ9BV36 600 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 IL1RAPL1Q9NZN1 696 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CCDC167Q9P0B6 97 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 SH3BGRLO75368 114 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ITGA2BP08514 1039 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ASPAP45381 313 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ARL4DP49703 201 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 FASTKD3Q14CZ7 662 aaKnown RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ACOX1Q15067 660 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 PFKFB4Q16877 469 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 INTS6LQ5JSJ4 861 aaKnown RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 BRMS1LQ5PSV4 323 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 TMEM154Q6P9G4 183 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 LRRC8DQ7L1W4 858 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 MED8Q96G25 268 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 SPG21Q9NZD8 308 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ZMYM5Q9UJ78 669 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 FBXO5Q9UKT4 447 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 FOXO6A8MYZ6 492 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 PCNAP12004 261 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 PAX3P23760 479 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 PRIM2P49643 509 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 XRCC4Q13426 336 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 PGS1Q32NB8 556 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ERAP2Q6P179 960 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CCDC149Q6ZUS6 474 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CLEC4CQ8WTT0 213 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 NKD2Q969F2 451 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 SLC24A3Q9HC58 644 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CHCHD3Q9NX63 227 aaKnown RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 EFR3BQ9Y2G0 817 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 DTNAQ9Y4J8 743 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 RAD51BO15315 384 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CA12O43570 354 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ALOX15P16050 662 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-203ENST00000368207 GALNT3Q14435 633 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 KYQ8NBH2 561 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ZNF555Q8NEP9 628 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 DBF4BQ8NFT6 615 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 KCTD4Q8WVF5 259 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CPT1BQ92523 772 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 JADE3Q92613 823 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 CEP19Q96LK0 163 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 TEX12Q9BXU0 123 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ASB8Q9H765 288 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ZNF112Q9UJU3 913 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ANKRD6Q9Y2G4 727 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 ACTL7BQ9Y614 415 aa12.48□□□□□ -0.41
PTPRK-203ENST00000368207 TRAV19A0A0A6YYK7 116 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 PDE5AO76074 875 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 POLR2EP19388 210 aaKnown RBP12.47□□□□□ -0.41
PTPRK-203ENST00000368207 TCHHL1Q5QJ38 904 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-203ENST00000368207 AP1ARQ63HQ0 302 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 TRABD2AQ86V40 505 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 SNX32Q86XE0 403 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 FNDC5Q8NAU1 212 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 OR6K2Q8NGY2 324 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 PIWIL2Q8TC59 973 aaKnown RBP12.47□□□□□ -0.41
PTPRK-203ENST00000368207 PRCCQ92733 491 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-203ENST00000368207 TWNKQ96RR1 684 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 PARVBQ9HBI1 364 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 LNPEPQ9UIQ6 1025 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 SNX10Q9Y5X0 201 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 RAD54BQ9Y620 910 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 C2CD4BA6NLJ0 364 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 PDZK1P1A8MUH7 402 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 CPSF4O95639 269 aaKnown RBP12.47□□□□□ -0.41
PTPRK-203ENST00000368207 TSPAN8P19075 237 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 PSMA4P25789 261 aaKnown RBP12.47□□□□□ -0.41
PTPRK-203ENST00000368207 GABRR2P28476 465 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 HSPA14Q0VDF9 509 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 CDC16Q13042 620 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 TMED1Q13445 227 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 DNAJC14Q6Y2X3 702 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-203ENST00000368207 OTOP3Q7RTS5 596 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 TMPRSS6Q8IU80 811 aa12.47□□□□□ -0.41
PTPRK-203ENST00000368207 HDAC10Q969S8 669 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms