RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 B3GNT6Q6ZMB0 384 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 CHST13Q8NET6 341 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 OR9I1Q8NGQ6 314 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 RPL10LQ96L21 214 aaKnown RBP11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 PDZD7Q9H5P4 517 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 GPAMQ9HCL2 828 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 ITGA11Q9UKX5 1188 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 PSMD13Q9UNM6 376 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 TLL2Q9Y6L7 1015 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 COMMD3-BMI1R4GMX3 469 aa11.22□□□□□ -0.61
NECTIN4-201ENST00000368012 NCF1BA6NI72 391 aaPredicted RBP11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 NCF1CA8MVU1 366 aaPredicted RBP11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 MCF2P10911 925 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 NCF1P14598 390 aaPredicted RBP11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 CPOXP36551 454 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 GRIA3P42263 894 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 ADARP55265 1226 aaKnown RBP11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 ZNF470Q6ECI4 717 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 CLEC6AQ6EIG7 209 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 AAGABQ6PD74 315 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 UTS2BQ765I0 119 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 NT5DC4Q86YG4 428 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 UBR7Q8N806 425 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 DGCR14Q96DF8 476 aaKnown RBP11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 PABPC5Q96DU9 382 aaKnown RBP11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 THAP11Q96EK4 314 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 CNDP1Q96KN2 507 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 FICDQ9BVA6 458 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 POMKQ9H5K3 350 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 FAM96AQ9H5X1 160 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 GIMAP2Q9UG22 337 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 LTBP1Q14766 1721 aa11.21□□□□□ -0.61
NECTIN4-201ENST00000368012 NR5A2O00482 541 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 RECQL4O94761 1208 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 TFPTP0C1Z6 253 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 TSHRP16473 764 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 NSUN2Q08J23 767 aaKnown RBP eCLIP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 VGLL4Q14135 290 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 NOMO2Q5JPE7 1267 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 GRTP1Q5TC63 336 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 DNERQ8NFT8 737 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 GRIN3AQ8TCU5 1115 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 ACTRT2Q8TDY3 377 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 TMIGD2Q96BF3 282 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 LENG1Q96BZ8 264 aaPredicted RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 SORT1Q99523 831 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 SEPHS2Q99611 448 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 CPNE1Q99829 537 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 CRYL1Q9Y2S2 319 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 ADM5C9JUS6 153 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 FAM72CH0Y354 149 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 H3BRB1 525 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 PDLIM1O00151 329 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 DYNC1LI2O43237 492 aaPredicted RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 SNNO75324 88 aaPredicted RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 UGT1A6P19224 532 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 NR4A1P22736 598 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 CNTFP26441 200 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 CDH5P33151 784 aaPredicted RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 BST2Q10589 180 aaKnown RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 NEDD8Q15843 81 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 CELF3Q5SZQ8 465 aaKnown RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 OTUD3Q5T2D3 398 aaPredicted RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 FAM72AQ5TYM5 149 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 FAM72DQ6L9T8 149 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 TTC33Q6PID6 262 aaPredicted RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 ATG14Q6ZNE5 492 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 SH2D5Q6ZV89 423 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 ZNF534Q76KX8 674 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 FAM72BQ86X60 149 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 TSPAN14Q8NG11 270 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 ULBP1Q9BZM6 244 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 MRPL46Q9H2W6 279 aaKnown RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 TUT1Q9H6E5 874 aaKnown RBP11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 COQ10BQ9H8M1 238 aa11.21□□□□□ -0.62
NECTIN4-201ENST00000368012 TTC24A2A3L6 582 aaPredicted RBP11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 BOLA2-SMG1P6H3BVE0 249 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 GCATO75600 419 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 TNFAIP8O95379 198 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 STMN1P16949 149 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 YBX3P16989 372 aaKnown RBP eCLIP11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 CCR3P51677 355 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 BCAT1P54687 386 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 LRRC8BQ6P9F7 803 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 APLFQ8IW19 511 aaPredicted RBP11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 FSTL5Q8N475 847 aaPredicted RBP11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 DCBLD1Q8N8Z6 715 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 SLC45A3Q96JT2 553 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 ZMAT2Q96NC0 199 aaKnown RBP11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 WDCPQ9H6R7 721 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 PLAC1Q9HBJ0 212 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 UBAP1Q9NZ09 502 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 AP4S1Q9Y587 144 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 NUP205Q92621 2012 aa11.2□□□□□ -0.62
NECTIN4-201ENST00000368012 ANKRD31Q8N7Z5 1873 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms