RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 LMO3Q8TAP4 145 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 ARRDC3Q96B67 414 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 MED8Q96G25 268 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 ATXN7L3BQ96GX2 97 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 RPRD1AQ96P16 312 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-212ENST00000366739 TRIM62Q9BVG3 475 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 SLC4A5Q9BY07 1137 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 FAM204AQ9H8W3 233 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.73□□□□□ -0.53
MRPL55-212ENST00000366739 COX16Q9P0S2 106 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 SLC12A6Q9UHW9 1150 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 VANGL2Q9ULK5 521 aa11.73□□□□□ -0.53
MRPL55-212ENST00000366739 ZFR2Q9UPR6 939 aaKnown RBP11.73□□□□□ -0.53
MRPL55-212ENST00000366739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 A0A1W2PQ27 194 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 A0A1W2PQ64 194 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 NEMP2A6NFY4 417 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 K7ERQ8 282 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 SLC28A2O43868 658 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 LZTS3O60299 673 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 SNAP91O60641 907 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 PCDH8O95206 1070 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 CENPBP07199 599 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 SRCP12931 536 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 CHRNA3P32297 505 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 DUSP3P51452 185 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 SKOR1P84550 965 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 KCNC4Q03721 635 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 ZNF177Q13360 481 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 AUHQ13825 339 aaKnown RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 CDKN3Q16667 212 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 ZNF658Q5TYW1 1059 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 NEK5Q6P3R8 708 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 GUSBP11Q6P575 273 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 IGF2-ASQ6U949 168 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 Q6ZSR6 202 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 CHST14Q8NCH0 376 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 ZNF548Q8NEK5 533 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 OR2A12Q8NGT7 310 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 RNF34Q969K3 372 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 KREMEN1Q96MU8 473 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 SLC46A1Q96NT5 459 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 THAP9Q9H5L6 903 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 USP29Q9HBJ7 922 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 METTL14Q9HCE5 456 aaKnown RBP11.72□□□□□ -0.53
MRPL55-212ENST00000366739 DDIT4Q9NX09 232 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 HS3ST2Q9Y278 367 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
MRPL55-212ENST00000366739 PIEZO2Q9H5I5 2752 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 CPED1A4D0V7 1026 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 A6NNZ2 444 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 K7ENP7 123 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 PMM2O15305 246 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 ARHGAP6O43182 974 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 SMAD6O43541 496 aaKnown RBP11.71□□□□□ -0.53
MRPL55-212ENST00000366739 SLC2A3P11169 496 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 KRT5P13647 590 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 RRM1P23921 792 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 RBMS1P29558 406 aaKnown RBP11.71□□□□□ -0.53
MRPL55-212ENST00000366739 CCR1P32246 355 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 HNRNPKP61978 463 aaKnown RBP eCLIP11.71□□□□□ -0.53
MRPL55-212ENST00000366739 CDK17Q00537 523 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 GCNT1Q02742 428 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 FZD2Q14332 565 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 TMEM259Q4ZIN3 620 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 INO80CQ6PI98 192 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-212ENST00000366739 CRTC1Q6UUV9 634 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 EFL1Q7Z2Z2 1120 aaKnown RBP11.71□□□□□ -0.53
MRPL55-212ENST00000366739 C14orf80Q86SX3 495 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 TMEM110Q86TL2 294 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 DEFB106AQ8N104 65 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 ATP11CQ8NB49 1132 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 GRIN3AQ8TCU5 1115 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 STK32AQ8WU08 396 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 IFT43Q96FT9 208 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-212ENST00000366739 BMFQ96LC9 184 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 MED15Q96RN5 788 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 PPP1R9BQ96SB3 815 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 PSMB7Q99436 277 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 MUC3BQ9H195 1237 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 ACP6Q9NPH0 428 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 DYRK4Q9NR20 520 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 GPR27Q9NS67 375 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 EVA1BQ9NVM1 165 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 RMND1Q9NWS8 449 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 ENTPD2Q9Y5L3 495 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 HS3ST4Q9Y661 456 aa11.71□□□□□ -0.53
MRPL55-212ENST00000366739 TDRD6O60522 2096 aaKnown RBP11.71□□□□□ -0.54
MRPL55-212ENST00000366739 POM121BA6NF01 834 aa11.7□□□□□ -0.54
MRPL55-212ENST00000366739 CASC3O15234 703 aaKnown RBP11.7□□□□□ -0.54
MRPL55-212ENST00000366739 RAD51BO15315 384 aa11.7□□□□□ -0.54
MRPL55-212ENST00000366739 CLDN11O75508 207 aa11.7□□□□□ -0.54
MRPL55-212ENST00000366739 GRAP2O75791 330 aa11.7□□□□□ -0.54
MRPL55-212ENST00000366739 LETM1O95202 739 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-212ENST00000366739 WISP1O95388 367 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms