RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CCDC137Q6PK04 289 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 SYDE1Q6ZW31 735 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 CYP4V2Q6ZWL3 525 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 BEND5Q7L4P6 421 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 BNIPLQ7Z465 357 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ANKS1BQ7Z6G8 1248 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 SLCO6A1Q86UG4 719 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 MON1AQ86VX9 555 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 SPATA2LQ8IUW3 424 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 DEFB106AQ8N104 65 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ALLCQ8N6M5 410 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 TTC16Q8NEE8 873 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 AENQ8WTP8 325 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 CASKIN2Q8WXE0 1202 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 NT5C3BQ969T7 300 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 PEBP4Q96S96 227 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 KCNK16Q96T55 309 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 HERPUD2Q9BSE4 406 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 FRMD8P1Q9BZ68 369 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ULBP1Q9BZM6 244 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 POPDC2Q9HBU9 364 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ZDHHC4Q9NPG8 344 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 FAM114A2Q9NRY5 505 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 TMEM30AQ9NV96 361 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 RRN3Q9NYV6 651 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 PCSK1NQ9UHG2 260 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 FEZ2Q9UHY8 353 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 UTP11Q9Y3A2 253 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 USP3Q9Y6I4 520 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 GJB3O75712 270 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 SEC31AO94979 1220 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 KLF8O95600 359 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 ZBED1O96006 694 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 MAGEA11P43364 429 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 MRPS21P82921 87 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 ATP11AP98196 1134 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 RPL6Q02878 288 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 CYP4F3Q08477 520 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 NNTQ13423 1086 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 CDO1Q16878 200 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 SMTNL2Q2TAL5 461 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 KCNT1Q5JUK3 1230 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 EMC10Q5UCC4 262 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 DUPD1Q68J44 220 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 TTC27Q6P3X3 843 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 EMBQ6PCB8 327 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 VSTM1Q6UX27 236 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 BBS12Q6ZW61 710 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 GPRIN1Q7Z2K8 1008 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 GLRX5Q86SX6 157 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 MARCH9Q86YJ5 346 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 JAMLQ86YT9 394 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 PSTKQ8IV42 348 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 MAP7D3Q8IWC1 876 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 DEFB119Q8N690 84 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 TTC13Q8NBP0 860 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 TXNDC5Q8NBS9 432 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 KCTD6Q8NC69 237 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 ATL2Q8NHH9 583 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 FAM71BQ8TC56 605 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 GRK7Q8WTQ7 553 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 C2orf15Q8WU43 125 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 HMGB4Q8WW32 186 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 MRPS31Q92665 395 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 CAVIN3Q969G5 261 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 NPY6RQ99463 290 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 ERP44Q9BS26 406 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 TRIM62Q9BVG3 475 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 HEMGNQ9BXL5 484 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 KLHL11Q9NVR0 708 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 KIAA1522Q9P206 1035 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 STAP1Q9ULZ2 295 aa11.57□□□□□ -0.56
CSNK1E-202ENST00000366216 ZSCAN5CA6NGD5 496 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 SGK1O00141 431 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 MAP2K7O14733 419 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 ECEL1O95672 775 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 MYBL2P10244 700 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 KRT10P13645 584 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 ABCG1P45844 678 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 CARSP49589 748 aaKnown RBP11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 ZNF33AQ06730 810 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 USP4Q13107 963 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 ERMARDQ5T6L9 678 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 BHLHA9Q7RTU4 235 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 TMPRSS7Q7RTY8 843 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 HDXQ7Z353 690 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 PGBD3Q8N328 593 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 ZNF843Q8N446 348 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 IL17RCQ8NAC3 791 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 C1orf54Q8WWF1 131 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 HSPH1Q92598 858 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 PGAP3Q96FM1 320 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 C8orf48Q96LL4 319 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 FUT8Q9BYC5 575 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 HCN2Q9UL51 889 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 DRG1Q9Y295 367 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms