RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SRGAP2O75044 1071 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RTN2O75298 545 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 KRT37O76014 449 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 GJB6O95452 261 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CD160O95971 181 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ATP1A3P13637 1013 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 GLDCP23378 1020 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 OR1E1P30953 314 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CLCN6P51797 869 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TAS2R38P59533 333 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PPP2CBP62714 309 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PPP2CAP67775 309 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ATP11AP98196 1134 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 UBXN1Q04323 297 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TYRO3Q06418 890 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ACCSLQ4AC99 568 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FAM46CQ5VWP2 391 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 UNQ6494/PRO21346Q6UXR6 183 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 STRADAQ7RTN6 431 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TFAP2DQ7Z6R9 452 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 DSG4Q86SJ6 1040 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SLCO6A1Q86UG4 719 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NLRP14Q86W24 1093 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 KDF1Q8NAX2 398 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TMIEQ8NEW7 156 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NEK11Q8NG66 645 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PIP4K2CQ8TBX8 421 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ADAMTS14Q8WXS8 1223 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 BPIFA3Q9BQP9 254 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 C11orf70Q9BRQ4 267 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SYT11Q9BT88 431 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ZYG11BQ9C0D3 744 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RETREG1Q9H6L5 497 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 OR12D3Q9UGF7 316 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 KLK13Q9UKR3 277 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 BTBD3Q9Y2F9 522 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CABIN1Q9Y6J0 2220 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 IGF2RP11717 2491 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CHD6Q8TD26 2715 aa14□□□□□ -0.17
TNFRSF1A-202ENST00000366159 LAMA5O15230 3695 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3DA0A087WVF3 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3IA0A087WXS9 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3EA0A087X179 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3KA0A087X1G2 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 A0A1B0GTQ1 180 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3FA6NER0 549 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3LB9A6J9 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FAM72CH0Y354 149 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 DFNA5O60443 496 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CAPNS1P04632 268 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3HP0C7X1 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FTH1P19P0C7X4 201 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RRM1P23921 792 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CD38P28907 300 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SDC4P31431 198 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RFC1P35251 1148 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 HDAC4P56524 1084 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CNTN1Q12860 1018 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SHBQ15464 509 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PIP5KL1Q5T9C9 394 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FAM72AQ5TYM5 149 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3GQ6DHY5 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3CQ6IPX1 549 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FAM72DQ6L9T8 149 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 MON1BQ7L1V2 547 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PHLDB2Q86SQ0 1253 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TRIM69Q86WT6 500 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FAM72BQ86X60 149 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TBC1D3Q8IZP1 549 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CHCHD4Q8N4Q1 142 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ATP11CQ8NB49 1132 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ANKRD20A12PQ8NF67 263 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 OR7D4Q8NG98 312 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 VOPP1Q96AW1 172 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ACE2Q9BYF1 805 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 MAGEB5Q9BZ81 275 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NDFIP2Q9NV92 336 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ADAM22Q9P0K1 906 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TP53BP1Q12888 1972 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SIGLEC16A6NMB1 481 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 C1QTNF3-AMACRE9PGA6 284 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TEX33O43247 280 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 KRT3P12035 628 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CDK11BP21127 795 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CHRNA3P32297 505 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NSFP46459 744 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ARF5P84085 180 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 GNA12Q03113 381 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SLC20A2Q08357 652 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SUZ12Q15022 739 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PPP1R15BQ5SWA1 713 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 WDR59Q6PJI9 974 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 LRSAM1Q6UWE0 723 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 LINGO4Q6UY18 593 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 IRF2BP2Q7Z5L9 587 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 AOPEPQ8N6M6 819 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 C3orf20Q8ND61 904 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SETD7Q8WTS6 366 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 BAP1Q92560 729 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms