RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 C4BPAP04003 597 aaKnown RBP13.67□□□□□ -0.22
LDB3-202ENST00000361373 LTA4HP09960 611 aaKnown RBP13.67□□□□□ -0.22
LDB3-202ENST00000361373 ZNF655Q8N720 491 aaPredicted RBP13.67□□□□□ -0.22
LDB3-202ENST00000361373 MED8Q96G25 268 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 MRPL45Q9BRJ2 306 aaKnown RBP13.67□□□□□ -0.22
LDB3-202ENST00000361373 NTPCRQ9BSD7 190 aaKnown RBP13.67□□□□□ -0.22
LDB3-202ENST00000361373 ACP6Q9NPH0 428 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 GUCA1CO95843 209 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 FGBP02675 491 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 PTPN4P29074 926 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 ZCCHC8Q6NZY4 707 aaKnown RBP13.67□□□□□ -0.22
LDB3-202ENST00000361373 TRAPPC5Q8IUR0 188 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 B4GALNT2Q8NHY0 566 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 STK32AQ8WU08 396 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 VPS50Q96JG6 964 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 MBOAT7Q96N66 472 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 ACBD6Q9BR61 282 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 ASB8Q9H765 288 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 PCDHGC3Q9UN70 934 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 SLC27A5Q9Y2P5 690 aa13.67□□□□□ -0.22
LDB3-202ENST00000361373 E9PBE3 544 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 KLHL41O60662 606 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 SMPD1P17405 629 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 FMO4P31512 558 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 TJAP1Q5JTD0 557 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 ATAD3BQ5T9A4 648 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 OR52K1Q8NGK4 314 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 FCRL2Q96LA5 508 aaPredicted RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 RNF19AQ9NV58 838 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 ARL15Q9NXU5 204 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 PCDHA11Q9Y5I1 949 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 ADRA1BP35368 520 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 LRRC36Q1X8D7 754 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 SHROOM1Q2M3G4 852 aaPredicted RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 FUT11Q495W5 492 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 ZDHHC20Q5W0Z9 365 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 PLEKHA7Q6IQ23 1121 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 BBS2Q9BXC9 721 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 MAGEC1O60732 1142 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 FTH1P02794 183 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 ITGB6P18564 788 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 LPOP22079 712 aaPredicted RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 DDR2Q16832 855 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 MTDHQ86UE4 582 aaKnown RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 CACNA2D2Q9NY47 1150 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 NQO1P15559 274 aaKnown RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 CDK18Q07002 472 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 INTS6LQ5JSJ4 861 aaKnown RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 TTC7BQ86TV6 843 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 C2orf15Q8WU43 125 aaKnown RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 MCCC1Q96RQ3 725 aaPredicted RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 MFSD1Q9H3U5 465 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
LDB3-202ENST00000361373 RPS6KB2Q9UBS0 482 aa13.66□□□□□ -0.22
LDB3-202ENST00000361373 USP12O75317 370 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 USP1O94782 785 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 GOT1P17174 413 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 GABRR2P28476 465 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 RAD23AP54725 363 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
LDB3-202ENST00000361373 RD3Q7Z3Z2 195 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 TMPRSS6Q8IU80 811 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 MRPL48Q96GC5 212 aaKnown RBP13.65□□□□□ -0.22
LDB3-202ENST00000361373 SLC28A3Q9HAS3 691 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 AGO1Q9UL18 857 aaKnown RBP13.65□□□□□ -0.22
LDB3-202ENST00000361373 SORCS3Q9UPU3 1222 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 CRYL1Q9Y2S2 319 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 NDUFAF1Q9Y375 327 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 DEAF1O75398 565 aaPredicted RBP13.65□□□□□ -0.22
LDB3-202ENST00000361373 CTSEP14091 401 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 MBTD1Q05BQ5 628 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
LDB3-202ENST00000361373 PARP15Q460N3 678 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 PRELID2Q8N945 189 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 FNDC5Q8NAU1 212 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 TIFAQ96CG3 184 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 KREMEN1Q96MU8 473 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 SLC25A23Q9BV35 468 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 DCLRE1BQ9H816 532 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 COMMD8Q9NX08 183 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 RPTORQ8N122 1335 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 PLOD1Q02809 727 aaPredicted RBP13.65□□□□□ -0.22
LDB3-202ENST00000361373 ACSM2AQ08AH3 577 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 MPPE1Q53F39 396 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 ACSM2BQ68CK6 577 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 SLC26A9Q7LBE3 791 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 MREGQ8N565 214 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 THAP11Q96EK4 314 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 EBNA1BP2Q99848 306 aaKnown RBP13.65□□□□□ -0.22
LDB3-202ENST00000361373 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
LDB3-202ENST00000361373 ENOPH1Q9UHY7 261 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms