RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TRMT10BQ6PF06 316 aaKnown RBP16.58■□□□□ 0.25
SCAF1-201ENST00000360565 TAGAPQ8N103 731 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 MYO1HQ8N1T3 1032 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 RBM15BQ8NDT2 890 aaKnown RBP16.58■□□□□ 0.25
SCAF1-201ENST00000360565 IPPQ9Y573 584 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 KAT6AQ92794 2004 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 FGF10O15520 208 aaPredicted RBP16.58■□□□□ 0.24
SCAF1-201ENST00000360565 MGRN1O60291 552 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 ITGALP20701 1170 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 CACHD1Q5VU97 1274 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 SERAC1Q96JX3 654 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 TWNKQ96RR1 684 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 HBS1LQ9Y450 684 aaKnown RBP16.58■□□□□ 0.24
SCAF1-201ENST00000360565 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 CRYBB1P53674 252 aaPredicted RBP16.58■□□□□ 0.24
SCAF1-201ENST00000360565 LRRC74AQ0VAA2 488 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 LRRC8BQ6P9F7 803 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 CCDC185Q8N715 623 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 ACOX2Q99424 681 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 DPEP3Q9H4B8 488 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 ARHGEF4Q9NR80 690 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 RAP2CQ9Y3L5 183 aa16.58■□□□□ 0.24
SCAF1-201ENST00000360565 KANSL1LA0AUZ9 987 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 SMNDC1O75940 238 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 USP1O94782 785 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 IFNA8P32881 189 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 BRCC3P46736 316 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 PFKFB4Q16877 469 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 PIWIL4Q7Z3Z4 852 aaKnown RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 DDX53Q86TM3 631 aaKnown RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 BHLHE22Q8NFJ8 381 aaPredicted RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 RIN3Q8TB24 985 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 DDX1Q92499 740 aaKnown RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 CLPTM1LQ96KA5 538 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 FIZ1Q96SL8 496 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 DERAQ9Y315 318 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 RGSL1A5PLK6 1076 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 KATNA1O75449 491 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 TCEA3O75764 348 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 ATP6AP2O75787 350 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 LTA4HP09960 611 aaKnown RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 HNRNPLP14866 589 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 TFEBP19484 476 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 FASP25445 335 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 OGDHQ02218 1023 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 MSLNQ13421 630 aaPredicted RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 CA9Q16790 459 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 TOP6BLQ8N6T0 577 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 GPR88Q9GZN0 384 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 SEMA6AQ9H2E6 1030 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 WDR55Q9H6Y2 383 aaPredicted RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 ACSS2Q9NR19 701 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 KANSL3Q9P2N6 904 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 GUCA1CO95843 209 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 PIRTP0C851 137 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 MLNP12872 115 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 SDHAF4Q5VUM1 108 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 RAP1GAP2Q684P5 730 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 MCRS1Q96EZ8 462 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 DACH2Q96NX9 599 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 POLR1EQ9GZS1 481 aaKnown RBP16.57■□□□□ 0.24
SCAF1-201ENST00000360565 DYRK4Q9NR20 520 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 NR2E3Q9Y5X4 410 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 PTCH2Q9Y6C5 1203 aa16.57■□□□□ 0.24
SCAF1-201ENST00000360565 TCRBV7S3A2A0A539 114 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 SLC15A5A6NIM6 579 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 BTN3A1O00481 513 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 FMO4P31512 558 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 RAB10P61026 200 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 MRPS6P82932 125 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 TEX44Q53QW1 395 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 SAMD4BQ5PRF9 694 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 OTUD3Q5T2D3 398 aaPredicted RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.56■□□□□ 0.248e-7■■■■■ 185.6
SCAF1-201ENST00000360565 BANPQ8N9N5 519 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 FNDC5Q8NAU1 212 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 CMASQ8NFW8 434 aaPredicted RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 FCRL2Q96LA5 508 aaPredicted RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 PRPF18Q99633 342 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 SFMBT1Q9UHJ3 866 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 PTPN9P43378 593 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 PPP3CCP48454 512 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 GPR141Q7Z602 305 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 METTL6Q8TCB7 284 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 CD101Q93033 1021 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 GFM2Q969S9 779 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 MFSD3Q96ES6 412 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 DTNBP1Q96EV8 351 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 MINDY3Q9H8M7 445 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 STARD7Q9NQZ5 370 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 NMRK1Q9NWW6 199 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 MPP6Q9NZW5 540 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 RAD54BQ9Y620 910 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 SYNCRIPO60506 623 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 CABYRO75952 493 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 MMP3P08254 477 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 KPNA1P52294 538 aaPredicted RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 NRF1Q16656 503 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms