RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 CEP41Q9BYV8 373 aa13.6□□□□□ -0.23
MACF1-202ENST00000360115 VANGL2Q9ULK5 521 aa13.6□□□□□ -0.23
MACF1-202ENST00000360115 SNX9Q9Y5X1 595 aa13.6□□□□□ -0.23
MACF1-202ENST00000360115 TRIP11Q15643 1979 aa13.6□□□□□ -0.23
MACF1-202ENST00000360115 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 C19orf81C9J6K1 198 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TK2O00142 265 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 BMP10O95393 424 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 AP2A1O95782 977 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 ATXN3P54252 364 aaPredicted RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 ITGA7Q13683 1181 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TRIM25Q14258 630 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 NRF1Q16656 503 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 ANO4Q32M45 955 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 MEX3CQ5U5Q3 659 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 NXNQ6DKJ4 435 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 ACOT1Q86TX2 421 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TRIM50Q86XT4 487 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 CLEC4CQ8WTT0 213 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TMA16Q96EY4 203 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 VPS39Q96JC1 886 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 NPAS2Q99743 824 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TASP1Q9H6P5 420 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 CASS4Q9NQ75 786 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 FAM49BQ9NUQ9 324 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 BFARQ9NZS9 450 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 SEPT10Q9P0V9 454 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 IPO11Q9UI26 975 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 A0A0G2JMZ2 1700 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 BRWD3Q6RI45 1802 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 DNAJB1P25685 340 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 CCR10P46092 362 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 RHDQ02161 417 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 SOWAHAQ2M3V2 549 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 IRAK1BP1Q5VVH5 260 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 ARHGAP17Q68EM7 881 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 NIM1KQ8IY84 436 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 STYXQ8WUJ0 223 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TMIGD2Q96BF3 282 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 RMND5BQ96G75 393 aaPredicted RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 MAELQ96JY0 434 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 TSNARE1Q96NA8 513 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 GPR20Q99678 358 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 GPR22Q99680 433 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 DNAI2Q9GZS0 605 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 PLGRKTQ9HBL7 147 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 OLAHQ9NV23 265 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 HACD3Q9P035 362 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 SARDHQ9UL12 918 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 PCDHGA7Q9Y5G6 932 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 ZSWIM8A7E2V4 1837 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 RPL34P49207 117 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 NUP107P57740 925 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 PSME3P61289 254 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TRAP1Q12931 704 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 PAFAH1B3Q15102 231 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 AMHR2Q16671 573 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 TRIM67Q6ZTA4 783 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 KCNMB4Q86W47 210 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 RIN3Q8TB24 985 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 MRPL45Q9BRJ2 306 aaKnown RBP13.59□□□□□ -0.23
MACF1-202ENST00000360115 ANKRD60Q9BZ19 345 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 PICK1Q9NRD5 415 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 MRGBPQ9NV56 204 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 FAIMQ9NVQ4 179 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 HOXC10Q9NYD6 342 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 ZNF112Q9UJU3 913 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 HES2Q9Y543 173 aa13.59□□□□□ -0.23
MACF1-202ENST00000360115 MYO18AQ92614 2054 aaKnown RBP13.58□□□□□ -0.23
MACF1-202ENST00000360115 DDHD2O94830 711 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 JUNP05412 331 aaKnown RBP13.58□□□□□ -0.24
MACF1-202ENST00000360115 ABCG1P45844 678 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 CLCN3P51790 818 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 GTF2A2P52657 109 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 NAGLUP54802 743 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 CXCL9Q07325 125 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 KRT80Q6KB66 452 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 FAM156AQ8NDB6 213 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 ACVR1CQ8NER5 493 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 RNF139Q8WU17 664 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 LRTOMTQ8WZ04 291 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 MOCOSQ96EN8 888 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 RANBP9Q96S59 729 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 TMEM79Q9BSE2 394 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 VPS45Q9NRW7 570 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.58□□□□□ -0.24
MACF1-202ENST00000360115 ADA2Q9NZK5 511 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 TLK1Q9UKI8 766 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 TCRBV3S1A0A5B6 114 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 SH3PXD2BA1X283 911 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 TRIM64CA6NLI5 447 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 TARM1B6A8C7 271 aa13.58□□□□□ -0.24
MACF1-202ENST00000360115 ZNF701M0R085 212 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms