RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 LIN7AO14910 233 aaPredicted RBP12.46□□□□□ -0.42
COL20A1-201ENST00000358894 TSPAN3O60637 253 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 ENDOD1O94919 500 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 TPBGLP0DKB5 382 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 IRF1P10914 325 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 GRIA4P48058 902 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 MAP3K10Q02779 954 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 FOXD4Q12950 439 aaPredicted RBP12.46□□□□□ -0.42
COL20A1-201ENST00000358894 C6orf10Q5SRN2 563 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 TIGD7Q6NT04 549 aaPredicted RBP12.46□□□□□ -0.42
COL20A1-201ENST00000358894 RELL1Q8IUW5 271 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 CASP10Q92851 521 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 SNX27Q96L92 541 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 CCDC90BQ9GZT6 254 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 AFF4Q9UHB7 1163 aaKnown RBP12.46□□□□□ -0.42
COL20A1-201ENST00000358894 ZNF180Q9UJW8 692 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 CRYL1Q9Y2S2 319 aa12.46□□□□□ -0.42
COL20A1-201ENST00000358894 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.42
COL20A1-201ENST00000358894 GOLGA4Q13439 2230 aaKnown RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 SLC12A8A0AV02 714 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 ERI2A8K979 691 aaKnown RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 GCATO75600 419 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 CCNB1P14635 433 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 ANPEPP15144 967 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 TSPAN8P19075 237 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 CDH5P33151 784 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 MAXP61244 160 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 OLIG2Q13516 323 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 C16orf72Q14CZ0 275 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 ZNF618Q5T7W0 954 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 SDHAF4Q5VUM1 108 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 NEPROQ6NW34 567 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 DRAXINQ8NBI3 349 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 PCYOX1LQ8NBM8 494 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 CATSPER1Q8NEC5 780 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 ZSCAN18Q8TBC5 510 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 JADE3Q92613 823 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 NCLNQ969V3 563 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 MYLPFQ96A32 169 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 ULK4Q96C45 1275 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 C7orf26Q96N11 449 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 GCNAQ96QF7 691 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 FAM192AQ9GZU8 254 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 PTPRHQ9HD43 1115 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 UBAP1Q9NZ09 502 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 ST3GAL5Q9UNP4 418 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 SPTLC1O15269 473 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 H2AFYO75367 372 aaKnown RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 TGDSO95455 350 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 RPL14P50914 215 aaKnown RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 ACSBG2Q5FVE4 666 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 SYPL2Q5VXT5 272 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 OTOP3Q7RTS5 596 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 VAT1Q99536 393 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 DRC3Q9H069 523 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 RRN3Q9NYV6 651 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 COPG2Q9UBF2 871 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 XPR1Q9UBH6 696 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 SFMBT1Q9UHJ3 866 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 WASF2Q9Y6W5 498 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 F8W8V4 182 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 PLIN3O60664 434 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 WFS1O76024 890 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 CHRM3P20309 590 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 IL10P22301 178 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 NAB1Q13506 487 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 USP50Q70EL3 339 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 PQLC3Q8N755 202 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 TRAPPC9Q96Q05 1148 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 NDEL1Q9GZM8 345 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 UTP6Q9NYH9 597 aaKnown RBP12.45□□□□□ -0.42
COL20A1-201ENST00000358894 NDUFA13Q9P0J0 144 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 FETUBQ9UGM5 382 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 CNTN6Q9UQ52 1028 aa12.45□□□□□ -0.42
COL20A1-201ENST00000358894 UBDO15205 165 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 COX4I1P13073 169 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 DPYSL2Q16555 572 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 TEDDM1Q5T9Z0 273 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 CYP2R1Q6VVX0 501 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 AGAP2Q99490 1192 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ADAM2Q99965 735 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 HAUS8Q9BT25 410 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 COLEC11Q9BWP8 271 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 MPP6Q9NZW5 540 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 MYBPHLA2RUH7 354 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 YJEFN3A6XGL0 299 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 MSI1O43347 362 aaKnown RBP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 HNRNPLP14866 589 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 HADHAP40939 763 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 SLC39A12Q504Y0 691 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 MRNIPQ6NTE8 343 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 CDHR3Q6ZTQ4 885 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 NET1Q7Z628 596 aaPredicted RBP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 CTU1Q7Z7A3 348 aaKnown RBP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 TMEM110Q86TL2 294 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 SPATA22Q8NHS9 363 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms