RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 MAFKO60675 156 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 RNF40O75150 1001 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 ZMPSTE24O75844 475 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 SRPRAP08240 638 aaKnown RBP15.55■□□□□ 0.08
TPM1-206ENST00000358278 ATP5OP48047 213 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 EIF3EP60228 445 aaKnown RBP15.55■□□□□ 0.08
TPM1-206ENST00000358278 IL10RBQ08334 325 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 ZNF234Q14588 700 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 EMC10Q5UCC4 262 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 SERPINA13PQ6UXR4 307 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 ATP11CQ8NB49 1132 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 PJA1Q8NG27 643 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 KIF18AQ8NI77 898 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 ACTRT1Q8TDG2 376 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 LRRN4Q8WUT4 740 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 NSMCE1Q8WV22 266 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 TFB1MQ8WVM0 346 aaKnown RBP15.55■□□□□ 0.08
TPM1-206ENST00000358278 BRD8Q9H0E9 1235 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 ZDHHC4Q9NPG8 344 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 SMARCAL1Q9NZC9 954 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 UBA2Q9UBT2 640 aaPredicted RBP15.55■□□□□ 0.08
TPM1-206ENST00000358278 SLC8A2Q9UPR5 921 aa15.55■□□□□ 0.08
TPM1-206ENST00000358278 R3HDM2Q9Y2K5 976 aaKnown RBP15.55■□□□□ 0.08
TPM1-206ENST00000358278 MTF2Q9Y483 593 aaPredicted RBP15.55■□□□□ 0.08
TPM1-206ENST00000358278 CHRNB1P11230 501 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 KIR2DL1P43626 348 aaPredicted RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 SERPINH1P50454 418 aaKnown RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 SLC20A2Q08357 652 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 PPIDQ08752 370 aaKnown RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 PTPRNQ16849 979 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 ACCSLQ4AC99 568 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 CCDC13Q8IYE1 715 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 CHPFQ8IZ52 775 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 SH2D3CQ8N5H7 860 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 RPLP0P6Q8NHW5 317 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 KCNV2Q8TDN2 545 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 ATG4AQ8WYN0 398 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 LMAN1LQ9HAT1 526 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 PDFQ9HBH1 243 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 HS3ST2Q9Y278 367 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 GOLGA6L10A0A0M3HER8 536 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 ANTXRLA6NF34 631 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 HACD1B0YJ81 288 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 NPC1O15118 1278 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 ZNF500O60304 480 aaPredicted RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 NEBLO76041 1014 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 MT-CO1P00395 513 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 RBP3P10745 1247 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 CCNCP24863 283 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 PAFAH1B1P43034 410 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 MRPS21P82921 87 aaKnown RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 XRCC4Q13426 336 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 TMCO4Q5TGY1 634 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 HEATR6Q6AI08 1181 aaKnown RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 B4GALNT4Q76KP1 1039 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 TRMT11Q7Z4G4 463 aaKnown RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 METTL3Q86U44 580 aaKnown RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 ZNF687Q8N1G0 1237 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 SYNPOQ8N3V7 929 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 ALLCQ8N6M5 410 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 TSGA13Q96PP4 275 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 QKIQ96PU8 341 aaKnown RBP eCLIP15.54■□□□□ 0.081e-8■■■■■ 42
TPM1-206ENST00000358278 FERMT1Q9BQL6 677 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 FRMD8P1Q9BZ68 369 aaPredicted RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 CACNA2D2Q9NY47 1150 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 SEPT10Q9P0V9 454 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 THAP10Q9P2Z0 257 aaPredicted RBP15.54■□□□□ 0.08
TPM1-206ENST00000358278 SIT1Q9Y3P8 196 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 ACTL7AQ9Y615 435 aa15.54■□□□□ 0.08
TPM1-206ENST00000358278 CXorf51AA0A1B0GTR3 108 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 TMEM221A6NGB7 291 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 M0R296 226 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 TMCC1O94876 653 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 PDGFBP01127 241 aaPredicted RBP15.53■□□□□ 0.08
TPM1-206ENST00000358278 SRCP12931 536 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 HNRNPLP14866 589 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■□□□ 12.2
TPM1-206ENST00000358278 CLCN6P51797 869 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 ZNF33AQ06730 810 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 PRKD1Q15139 912 aaPredicted RBP15.53■□□□□ 0.08
TPM1-206ENST00000358278 SLC45A4Q5BKX6 768 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 SDE2Q6IQ49 451 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 DARS2Q6PI48 645 aaKnown RBP15.53■□□□□ 0.08
TPM1-206ENST00000358278 CREG2Q8IUH2 290 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 CDKL3Q8IVW4 592 aaPredicted RBP15.53■□□□□ 0.08
TPM1-206ENST00000358278 CCDC105Q8IYK2 499 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 USP33Q8TEY7 942 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 C1orf54Q8WWF1 131 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 CASKIN2Q8WXE0 1202 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 MRGPRX3Q96LB0 322 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 ZNF599Q96NL3 588 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 AP1M1Q9BXS5 423 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 OSBPL6Q9BZF3 934 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 RNF14Q9UBS8 474 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 SLCO3A1Q9UIG8 710 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 HCN2Q9UL51 889 aa15.53■□□□□ 0.08
TPM1-206ENST00000358278 FCF1Q9Y324 198 aaKnown RBP15.53■□□□□ 0.08
TPM1-206ENST00000358278 K7ERQ8 282 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 KCNK1O00180 336 aa15.52■□□□□ 0.08
TPM1-206ENST00000358278 TNFRSF10AO00220 468 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms