RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ZNF234Q14588 700 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 PDK1Q15118 436 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 FBXO43Q4G163 708 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 RETSATQ6NUM9 610 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 Q6ZS52 159 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 BZW1Q7L1Q6 419 aaKnown RBP15.17■□□□□ 0.02
CCNE1-202ENST00000357943 LRRC49Q8IUZ0 686 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 TTC13Q8NBP0 860 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 FLCNQ8NFG4 579 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 PJA1Q8NG27 643 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 UCMAQ8WVF2 138 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 C1orf54Q8WWF1 131 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 LMAN1LQ9HAT1 526 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 CACNA2D2Q9NY47 1150 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 THAP10Q9P2Z0 257 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-202ENST00000357943 SLC25A13Q9UJS0 675 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 PLA2G4CQ9UP65 541 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 HS3ST2Q9Y278 367 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 USP34Q70CQ2 3546 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 SMAD6O43541 496 aaKnown RBP15.16■□□□□ 0.02
CCNE1-202ENST00000357943 RBP3P10745 1247 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 SRCP12931 536 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 CCNCP24863 283 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 IL12RB1P42701 662 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 SERPINH1P50454 418 aaKnown RBP15.16■□□□□ 0.02
CCNE1-202ENST00000357943 EIF3EP60228 445 aaKnown RBP15.16■□□□□ 0.02
CCNE1-202ENST00000357943 PPIDQ08752 370 aaKnown RBP15.16■□□□□ 0.02
CCNE1-202ENST00000357943 SH2D3CQ8N5H7 860 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 ZNF366Q8N895 744 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 IL17RCQ8NAC3 791 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 ATP11CQ8NB49 1132 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 RPLP0P6Q8NHW5 317 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 TFB1MQ8WVM0 346 aaKnown RBP15.16■□□□□ 0.02
CCNE1-202ENST00000357943 TSGA13Q96PP4 275 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 NELL2Q99435 816 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 AP1M1Q9BXS5 423 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 MFSD1Q9H3U5 465 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 DNPEPQ9ULA0 475 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 TECTAO75443 2155 aa15.16■□□□□ 0.02
CCNE1-202ENST00000357943 ZSCAN5CA6NGD5 496 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 H7C0C1 242 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 KCNK1O00180 336 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 PDE2AO00408 941 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 MCF2LO15068 1137 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 URI1O94763 535 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 SLC34A2O95436 690 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 SRPRAP08240 638 aaKnown RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 HNRNPLP14866 589 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 VAV1P15498 845 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 WASP42768 502 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 ATP5OP48047 213 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 GAS6Q14393 721 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 PRKD1Q15139 912 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 FNDC3BQ53EP0 1204 aaKnown RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 DNTTIP2Q5QJE6 756 aaKnown RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 CWF19L1Q69YN2 538 aaKnown RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 PKN3Q6P5Z2 889 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 CCDC13Q8IYE1 715 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 CCDC105Q8IYK2 499 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 CHPFQ8IZ52 775 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 ALLCQ8N6M5 410 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 PRELID2Q8N945 189 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 SLC35B2Q8TB61 432 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 MAIP1Q8WWC4 291 aa15.15■□□□□ 0.02
CCNE1-202ENST00000357943 ZNF419Q96HQ0 510 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 NAP1L3Q99457 506 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 COL25A1Q9BXS0 654 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 UBA2Q9UBT2 640 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 FCF1Q9Y324 198 aaKnown RBP15.15■□□□□ 0.02
CCNE1-202ENST00000357943 TMEM221A6NGB7 291 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 TTC34A8MYJ7 566 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 M0R296 226 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 MATN3O15232 486 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 LIASO43766 372 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 ZNF821O75541 412 aaPredicted RBP15.14■□□□□ 0.01
CCNE1-202ENST00000357943 TMCC1O94876 653 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 DCNP07585 359 aaKnown RBP15.14■□□□□ 0.01
CCNE1-202ENST00000357943 HLA-EP13747 358 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 RBL1P28749 1068 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 NNMTP40261 264 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 ST8SIA6P61647 398 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 MRPS21P82921 87 aaKnown RBP15.14■□□□□ 0.01
CCNE1-202ENST00000357943 ZNF33AQ06730 810 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 SLC20A2Q08357 652 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 SLC10A7Q0GE19 358 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 XRCC4Q13426 336 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 SNX1Q13596 522 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 LRRC32Q14392 662 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 ACCSLQ4AC99 568 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 INO80DQ53TQ3 878 aaPredicted RBP15.14■□□□□ 0.01
CCNE1-202ENST00000357943 SLC45A4Q5BKX6 768 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 DGKKQ5KSL6 1271 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 TIGD7Q6NT04 549 aaPredicted RBP15.14■□□□□ 0.01
CCNE1-202ENST00000357943 SERPINA13PQ6UXR4 307 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 KIF18AQ8NI77 898 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 FRS2Q8WU20 508 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 QKIQ96PU8 341 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCNE1-202ENST00000357943 BRD8Q9H0E9 1235 aa15.14■□□□□ 0.01
CCNE1-202ENST00000357943 TMEM245Q9H330 911 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms