RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 CCR10P46092 362 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 NRF1Q16656 503 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 DUS1LQ6P1R4 473 aaKnown RBP24.1■■□□□ 1.45
NPAS3-203ENST00000357798 PLPPR4Q7Z2D5 763 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 PSTKQ8IV42 348 aaKnown RBP24.1■■□□□ 1.45
NPAS3-203ENST00000357798 TMEM151AQ8N4L1 468 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 CLEC4CQ8WTT0 213 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 C1QTNF1Q9BXJ1 281 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 ZNHIT2Q9UHR6 403 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 KYAT1Q16773 422 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 SOWAHAQ2M3V2 549 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 SH3D19Q5HYK7 790 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 MAMDC4Q6UXC1 1216 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 VPS39Q96JC1 886 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 TSNARE1Q96NA8 513 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 PICK1Q9NRD5 415 aa24.1■■□□□ 1.45
NPAS3-203ENST00000357798 TK2O00142 265 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 GTF2A2P52657 109 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 ITGA7Q13683 1181 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 TRIM25Q14258 630 aaKnown RBP24.09■■□□□ 1.45
NPAS3-203ENST00000357798 ANO4Q32M45 955 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 TMIGD2Q96BF3 282 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 DUS3LQ96G46 650 aaKnown RBP24.09■■□□□ 1.45
NPAS3-203ENST00000357798 PGLYRP2Q96PD5 576 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 HOXC10Q9NYD6 342 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 ZSWIM8A7E2V4 1837 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 ZNF189O75820 626 aaPredicted RBP24.09■■□□□ 1.45
NPAS3-203ENST00000357798 BMP10O95393 424 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 AP2A1O95782 977 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 SBK3P0C264 359 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 ABCG1P45844 678 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 PSME3P61289 254 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 RHDQ02161 417 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 LSMEM2Q8N112 164 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 RMND5BQ96G75 393 aaPredicted RBP24.09■■□□□ 1.45
NPAS3-203ENST00000357798 GPR20Q99678 358 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 MRPL45Q9BRJ2 306 aaKnown RBP24.09■■□□□ 1.45
NPAS3-203ENST00000357798 PLGRKTQ9HBL7 147 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 CASS4Q9NQ75 786 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 ADA2Q9NZK5 511 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 IPO11Q9UI26 975 aaKnown RBP24.09■■□□□ 1.45
NPAS3-203ENST00000357798 HES2Q9Y543 173 aa24.09■■□□□ 1.45
NPAS3-203ENST00000357798 YBX3P16989 372 aaKnown RBP eCLIP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 NAGLUP54802 743 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 CXCL9Q07325 125 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 TRIM67Q6ZTA4 783 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 KCNMB4Q86W47 210 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 CCNYQ8ND76 341 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 TRAPPC12Q8WVT3 735 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 MOCOSQ96EN8 888 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 MARK4Q96L34 752 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 ZNF512Q96ME7 567 aaPredicted RBP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 UHRF1Q96T88 793 aaPredicted RBP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 DNAI2Q9GZS0 605 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 PRDM12Q9H4Q4 367 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 C20orf96Q9NUD7 363 aaPredicted RBP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 TLK1Q9UKI8 766 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 PCDHGA7Q9Y5G6 932 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 A0A0G2JMZ2 1700 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 LRRC37A2A6NM11 1700 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 DDHD2O94830 711 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 HNRNPCP07910 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 TCN1P20061 433 aaPredicted RBP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 CLCN3P51790 818 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 NUP107P57740 925 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 TRAP1Q12931 704 aaKnown RBP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 ARHGAP17Q68EM7 881 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 KRT80Q6KB66 452 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 EFCAB12Q6NXP0 572 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 PID1Q7Z2X4 250 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 NT5DC4Q86YG4 428 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 FAM156AQ8NDB6 213 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 STYXQ8WUJ0 223 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 GPR22Q99680 433 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 TMEM79Q9BSE2 394 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 OLAHQ9NV23 265 aa24.08■■□□□ 1.45
NPAS3-203ENST00000357798 FAF1Q9UNN5 650 aaPredicted RBP24.08■■□□□ 1.45
NPAS3-203ENST00000357798 FAM155AB1AL88 458 aaPredicted RBP24.08■■□□□ 1.44
NPAS3-203ENST00000357798 F7P08709 466 aaPredicted RBP24.08■■□□□ 1.44
NPAS3-203ENST00000357798 DNAJB1P25685 340 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 PHKA2P46019 1235 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 OLIG2Q13516 323 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 LY6KQ17RY6 165 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 DCAF15Q66K64 600 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 ZSCAN18Q8TBC5 510 aaPredicted RBP24.08■■□□□ 1.44
NPAS3-203ENST00000357798 RNF139Q8WU17 664 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 LRTOMTQ8WZ04 291 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 MAELQ96JY0 434 aaKnown RBP24.08■■□□□ 1.44
NPAS3-203ENST00000357798 CAAP1Q9H8G2 361 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 FAIMQ9NVQ4 179 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 ZNF112Q9UJU3 913 aa24.08■■□□□ 1.44
NPAS3-203ENST00000357798 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.08■■□□□ 1.44
NPAS3-203ENST00000357798 TANC1Q9C0D5 1861 aa24.07■■□□□ 1.44
NPAS3-203ENST00000357798 JUNP05412 331 aaKnown RBP24.07■■□□□ 1.44
NPAS3-203ENST00000357798 TPP2P29144 1249 aaPredicted RBP24.07■■□□□ 1.44
NPAS3-203ENST00000357798 PAFAH1B3Q15102 231 aaKnown RBP24.07■■□□□ 1.44
NPAS3-203ENST00000357798 AMHR2Q16671 573 aa24.07■■□□□ 1.44
NPAS3-203ENST00000357798 ACVR1CQ8NER5 493 aa24.07■■□□□ 1.44
NPAS3-203ENST00000357798 RIN3Q8TB24 985 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms