RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CD48P09326 243 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RBP3P10745 1247 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 GABRB2P47870 512 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 TKTL1P51854 596 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 AQP5P55064 265 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 YWHAGP61981 247 aaKnown RBP eCLIP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 ARHGAP8P85298 464 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 ACAP1Q15027 740 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 CHI3L2Q15782 390 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 PSMD5Q16401 504 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 CDO1Q16878 200 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RABGAP1LQ5R372 815 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 DHDDSQ86SQ9 333 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 TMEM110Q86TL2 294 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 CRLF3Q8IUI8 442 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 OR6Y1Q8NGX8 325 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RAD9AQ99638 391 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 MECRQ9BV79 373 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 IQCGQ9H095 443 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 CRISPLD1Q9H336 500 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 POPDC2Q9HBU9 364 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 A0A1B0GVG6 124 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 ARHGEF15O94989 841 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 PENKP01210 267 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 USP17L7P0C7H9 530 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 L1CAMP32004 1257 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 CRHR1P34998 444 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 PABPC1LQ4VXU2 614 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RAB6CQ53S08 254 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 STXBP5Q5T5C0 1151 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 SH3PXD2AQ5TCZ1 1133 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RASIP1Q5U651 963 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 OLFML1Q6UWY5 402 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RNF111Q6ZNA4 994 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 TIFABQ6ZNK6 161 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RFX8Q6ZV50 586 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 ANKS3Q6ZW76 656 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RAPH1Q70E73 1250 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 DCP1BQ8IZD4 617 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 ST13P4Q8IZP2 240 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 SIX6OS1Q8N1H7 587 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 SCAMP5Q8TAC9 235 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 FAM149B1Q96BN6 582 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 MCRS1Q96EZ8 462 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 SLC9A7Q96T83 725 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 TTC1Q99614 292 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 SEPT5Q99719 369 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 C20orf27Q9GZN8 174 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 RAB6CQ9H0N0 254 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 REV3LO60673 3130 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 CXorf49A8MYA2 514 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 SOD2P04179 222 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 LINC00271P0C7V0 271 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 UQCRBP14927 111 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 SLC6A3Q01959 620 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 ROR1Q01973 937 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 KDSRQ06136 332 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 ASPHQ12797 758 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 DUSP4Q13115 394 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 MSLNQ13421 630 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 MAPRE1Q15691 268 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 C15orf59Q2T9L4 293 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 MGAT5BQ3V5L5 792 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 EFHC1Q5JVL4 640 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 TRNP1Q6NT89 227 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 RFX6Q8HWS3 928 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 NUDCD3Q8IVD9 361 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 SPATA18Q8TC71 538 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 JADE3Q92613 823 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 LRRC39Q96DD0 335 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 NDNQ99608 321 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 C17orf80Q9BSJ5 609 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 CERS4Q9HA82 394 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 USP29Q9HBJ7 922 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 THAP1Q9NVV9 213 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 WDR27A2RRH5 827 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 CASQ2O14958 399 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 PEX1O43933 1283 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 USP1O94782 785 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 TRUB2O95900 331 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 CTNNB1P35222 781 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 GLUD2P49448 558 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 PDE1BQ01064 536 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 MTM1Q13496 603 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 HFE2Q6ZVN8 426 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 PPM1NQ8N819 430 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 B4GALNT2Q8NHY0 566 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 CLSTN3Q9BQT9 956 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 ULBP1Q9BZM6 244 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 ZNF395Q9H8N7 513 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 SMYD2Q9NRG4 433 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 NDUFA13Q9P0J0 144 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 PAK5Q9P286 719 aa12.93□□□□□ -0.34
RTFDC1-202ENST00000357348 NR2E3Q9Y5X4 410 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms