RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 CACNG3O60359 315 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 GLP2RO95838 553 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 GOLGA6DP0CG33 693 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
HOXA1-202ENST00000355633 NUMBP49757 651 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 SLC10A7Q0GE19 358 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 CBLBQ13191 982 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 CDH18Q13634 790 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 ZNF77Q15935 545 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 CEP85LQ5SZL2 805 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 MPP7Q5T2T1 576 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 RNF219Q5W0B1 726 aaPredicted RBP13.89□□□□□ -0.19
HOXA1-202ENST00000355633 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 TMEM184AQ6ZMB5 413 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 ZNF783Q6ZMS7 281 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 TPGS1Q6ZTW0 290 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 ZNF534Q76KX8 674 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 OTOP3Q7RTS5 596 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 ANKMY2Q8IV38 441 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 ARID3BQ8IVW6 561 aaPredicted RBP13.89□□□□□ -0.19
HOXA1-202ENST00000355633 PYROXD1Q8WU10 500 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 BHMTQ93088 406 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 FCRL5Q96RD9 977 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 MUC3BQ9H195 1237 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 MED4Q9NPJ6 270 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 GOLGA6AQ9NYA3 693 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.89□□□□□ -0.19
HOXA1-202ENST00000355633 KDELR3O43731 214 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 OPA1O60313 960 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 AVILO75366 819 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 AP2A1O95782 977 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 SHBGP04278 402 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 CYBBP04839 570 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 TCF3P15923 654 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 GRIA1P42261 906 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 MMP13P45452 471 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 OXCT1P55809 520 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 USP4Q13107 963 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 DNAJC21Q5F1R6 531 aaKnown RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 TMCO4Q5TGY1 634 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 POTEHQ6S545 545 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 TEX26Q8N6G2 289 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 EFHBQ8N7U6 833 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 GOLGA6L1Q8N7Z2 621 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 FBXO36Q8NEA4 188 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 PPP1R2P1Q96PQ5 205 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 MLPHQ9BV36 600 aaPredicted RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 APOL5Q9BWW9 433 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 ZNF576Q9H609 170 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 PDFQ9HBH1 243 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 ATP13A1Q9HD20 1204 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 NT5MQ9NPB1 228 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 OGFRQ9NZT2 677 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 AAR2Q9Y312 384 aaKnown RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 LAMA3Q16787 3333 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 NUP210Q8TEM1 1887 aaPredicted RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 LINC01565O15544 149 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 PSMD3O43242 534 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 SYF2O95926 243 aaKnown RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 MLNP12872 115 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 MAGEA3P43357 314 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 IFNAR2P48551 515 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 ZNF844Q08AG5 666 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 LBRQ14739 615 aaKnown RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 CCDC38Q502W7 563 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 FSCBQ5H9T9 825 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 KCTD11Q693B1 232 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 LRRC8BQ6P9F7 803 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 LEKR1Q6ZMV7 388 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 GPR149Q86SP6 731 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 CCDC117Q8IWD4 279 aaPredicted RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 SH3GL2Q99962 352 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 WDR83Q9BRX9 315 aaKnown RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 ACE2Q9BYF1 805 aaPredicted RBP13.88□□□□□ -0.19
HOXA1-202ENST00000355633 LRRC4CQ9HCJ2 640 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 UBP1Q9NZI7 540 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 TBC1D14Q9P2M4 693 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 CHMP2BQ9UQN3 213 aa13.88□□□□□ -0.19
HOXA1-202ENST00000355633 MYO9BQ13459 2157 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.87□□□□□ -0.19
HOXA1-202ENST00000355633 H3BQF6 201 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 CBX4O00257 560 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 ANXA9O76027 345 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 SUN1O94901 812 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 FSHRP23945 695 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 ELK3P41970 407 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 TNK2Q07912 1038 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 SPARCL1Q14515 664 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 KLHDC8BQ8IXV7 354 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 ATP11CQ8NB49 1132 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 SPATA22Q8NHS9 363 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 OXNAD1Q96HP4 312 aaPredicted RBP13.87□□□□□ -0.19
HOXA1-202ENST00000355633 PRO3102Q9H379 93 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 LRRC40Q9H9A6 602 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 VPS37BQ9H9H4 285 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms