RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 VTI1BQ9UEU0 232 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 DDHD2O94830 711 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 RHOBTB1O94844 696 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 GSCP56915 257 aaPredicted RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 PRKCQQ04759 706 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 SPDYAQ5MJ70 313 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 LPCAT2Q7L5N7 544 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 SZRD1Q7Z422 152 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 CCDC126Q96EE4 140 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 PHF21BQ96EK2 531 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 CPXM1Q96SM3 734 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 VPS9D1Q9Y2B5 631 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 LRCH4O75427 683 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 BPGMP07738 259 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 ETS2P15036 469 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 GABRB2P47870 512 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 RGS4P49798 205 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 ROR2Q01974 943 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 NOMO1Q15155 1222 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 PTRHD1Q6GMV3 140 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 MARK2Q7KZI7 788 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 ARNTL2Q8WYA1 636 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 HBS1LQ9Y450 684 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 MAGEB16A2A368 324 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 ALBP02768 609 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 SLC10A3P09131 477 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 FGFR3P22607 806 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 ACLYP53396 1101 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 LPCAT4Q643R3 524 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 ZFP1Q6P2D0 407 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 XYLT1Q86Y38 959 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 EDEM1Q92611 657 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 PRPF18Q99633 342 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 CDT1Q9H211 546 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 GPAMQ9HCL2 828 aa12.52□□□□□ -0.41
COLCA1-201ENST00000355430 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.41
COLCA1-201ENST00000355430 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 CLUHO75153 1309 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 OR6C75A6NL08 312 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 TPBGLP0DKB5 382 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 RPL14P50914 215 aaKnown RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 SMARCB1Q12824 385 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 LBRQ14739 615 aaKnown RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 AASDHQ4L235 1098 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 RNF217Q8TC41 542 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 SLCO2A1Q92959 643 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 NR1H4Q96RI1 486 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 OXCT2Q9BYC2 517 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 TCEA3O75764 348 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 PLIN5Q00G26 463 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 CDH17Q12864 832 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 FASTKQ14296 549 aaKnown RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 WDR41Q9HAD4 459 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 LATS2Q9NRM7 1088 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 NKX1-2Q9UD57 310 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 C2orf81A6NN90 581 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 ITGA2BP08514 1039 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF23P17027 643 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 SMPD1P17405 629 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 SP100P23497 879 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 TAF5Q15542 800 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 TBCELQ5QJ74 424 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 PCDH20Q8N6Y1 951 aaKnown RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 C12orf29Q8N999 325 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 BLOC1S5Q8TDH9 187 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 FAM162AQ96A26 154 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 CERS2Q96G23 380 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 TTPALQ9BTX7 342 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 ANKRD6Q9Y2G4 727 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 NCF1BA6NI72 391 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 NCF1CA8MVU1 366 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 ARVCFO00192 962 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 CFHP08603 1231 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 NCF1P14598 390 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 FBXW4P57775 412 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 KRT72Q14CN4 511 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 NRF1Q16656 503 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 ABHD15Q6UXT9 468 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
COLCA1-201ENST00000355430 LPPQ93052 612 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 ARHGAP28Q9P2N2 729 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 RBPJLQ9UBG7 517 aa12.51□□□□□ -0.41
COLCA1-201ENST00000355430 CBX4O00257 560 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PYGLP06737 847 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ATP5C1P36542 298 aaKnown RBP12.5□□□□□ -0.41
COLCA1-201ENST00000355430 NPY2RP49146 381 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 TLE2Q04725 743 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 EML3Q32P44 896 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 EEF1DP3Q658K8 133 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 GPR88Q9GZN0 384 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms