RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 C6orf222P0C671 652 aaPredicted RBP8.13□□□□□ -1.11
HTT-201ENST00000355072 PCID2Q5JVF3 399 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 PGAM4Q8N0Y7 254 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 ZNF548Q8NEK5 533 aaPredicted RBP8.13□□□□□ -1.11
HTT-201ENST00000355072 CASKIN2Q8WXE0 1202 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 NXF1Q9UBU9 619 aaKnown RBP8.13□□□□□ -1.11
HTT-201ENST00000355072 RGS10O43665 173 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 ASMTP46597 345 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 SLC9A3P48764 834 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 ALDH3A2P51648 485 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 PSME3P61289 254 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 PON3Q15166 354 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 RBM48Q5RL73 367 aaKnown RBP8.13□□□□□ -1.11
HTT-201ENST00000355072 CIDECQ96AQ7 238 aaPredicted RBP8.13□□□□□ -1.11
HTT-201ENST00000355072 MARCH7Q9H992 704 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 PRMT7Q9NVM4 692 aaPredicted RBP8.13□□□□□ -1.11
HTT-201ENST00000355072 SHROOM3Q8TF72 1996 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 TNFRSF21O75509 655 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 CD151P48509 253 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 RAB27AP51159 221 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 FOXM1Q08050 763 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 FAAH2Q6GMR7 532 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 CHSY1Q86X52 802 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 BTF3L4Q96K17 158 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 CLCA2Q9UQC9 943 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 LAMA4Q16363 1823 aa8.13□□□□□ -1.11
HTT-201ENST00000355072 COL6A2P12110 1019 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 MAPK3P27361 379 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 PLEKHN1Q494U1 663 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 KIF18BQ86Y91 864 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 DNAJB3Q8WWF6 145 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 LEF1Q9UJU2 399 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 TFECO14948 347 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 HDAC3O15379 428 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 FGFR2P21802 821 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ZNF268Q14587 947 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 CFAP206Q8IYR0 622 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 FNDC5Q8NAU1 212 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ADI1Q9BV57 179 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 DNAJC11Q9NVH1 559 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TFCP2L1Q9NZI6 479 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 GULP1Q9UBP9 304 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 STUB1Q9UNE7 303 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 DUSP12Q9UNI6 340 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 FCHO1O14526 889 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 METTL18O95568 372 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 UBE3AQ05086 875 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 LIN52Q52LA3 116 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ANXA8L1Q5VT79 327 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 EPHX4Q8IUS5 362 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 UNC5BQ8IZJ1 945 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 C9orf72Q96LT7 481 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 C1QTNF7Q9BXJ2 289 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 MAB21L2Q9Y586 359 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 PTPRJQ12913 1337 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TTPAP49638 278 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 SBK1Q52WX2 424 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ANKRD40Q6AI12 368 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 SLC25A25Q6KCM7 469 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 GLB1L3Q8NCI6 653 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 AURKBQ96GD4 344 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 SLC39A10Q9ULF5 831 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 NARSO43776 548 aaKnown RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 OTCP00480 354 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 SLC4A1P02730 911 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 NME5P56597 212 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ST8SIA6P61647 398 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 RRP1BQ14684 758 aaKnown RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 POLD3Q15054 466 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 NDUFA9Q16795 377 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 SLFN11Q7Z7L1 901 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 GSPT2Q8IYD1 628 aaKnown RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 LARGE2Q8N3Y3 721 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 GOLM1Q8NBJ4 401 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 MCOLN3Q8TDD5 553 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 FBXO44Q9H4M3 255 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 AP4B1Q9Y6B7 739 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ETV6P41212 452 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 PRKCEQ02156 737 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 CLNKQ7Z7G1 428 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 EXT2Q93063 718 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 HERC2P3Q9BVR0 1158 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ARL15Q9NXU5 204 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 H3BN98 237 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ZNF682O95780 498 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ODC1P11926 461 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 HPGDP15428 266 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 KLRC1P26715 233 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 IST1P53990 364 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 EPHA7Q15375 998 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TRAM1Q15629 374 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ZNF248Q8NDW4 579 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 NAT14Q8WUY8 206 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 PPP3R2Q96LZ3 170 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TRPV5Q9NQA5 729 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 ZNF806P0C7X5 589 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 EIF2S3P41091 472 aaKnown RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 ALDH9A1P49189 494 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TAS2R43P59537 309 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms