RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ACO2Q99798 780 aaKnown RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TPK1Q9H3S4 243 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NMRAL1Q9HBL8 299 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 PCDH12Q9NPG4 1184 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 SLC39A10Q9ULF5 831 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 PCDHGC3Q9UN70 934 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ADAMTSL1Q8N6G6 1762 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ERBB2P04626 1255 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 GSSP48637 474 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NME5P56597 212 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 JAG1P78504 1218 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CAMK1DQ8IU85 385 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CDKL3Q8IVW4 592 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CCNYQ8ND76 341 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF669Q96BR6 464 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ANKRD36BP1Q96IX9 119 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TCF12Q99081 682 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CGRRF1Q99675 332 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NIF3L1Q9GZT8 377 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 VPS33BQ9H267 617 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 SIAEQ9HAT2 523 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 MRPL40Q9NQ50 206 aaKnown RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CNOT11Q9UKZ1 510 aaKnown RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ACOT8O14734 319 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DHX15O43143 795 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 AQP9O43315 295 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 MED7O43513 233 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 MYO1DO94832 1006 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 GPD1P21695 349 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 IL10P22301 178 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TTKP33981 857 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 GP5P40197 560 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 RGS7P49802 495 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 NFATC3Q12968 1075 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SLC27A3Q5K4L6 730 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DEPDC1Q5TB30 811 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 RC3H1Q5TC82 1133 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TTC30AQ86WT1 665 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 EXOC8Q8IYI6 725 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DNAAF3Q8N9W5 541 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 MAGEE2Q8TD90 523 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DHRS1Q96LJ7 313 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SLC39A3Q9BRY0 314 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 ANKRD60Q9BZ19 345 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 NOL6Q9H6R4 1146 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DBNDD1Q9H9R9 158 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 FANCEQ9HB96 536 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 ANKEF1Q9NU02 776 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SCHIP1Q9P0W5 487 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SUN2Q9UH99 717 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 EGFL7Q9UHF1 273 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 POU2F3Q9UKI9 436 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 FZD1Q9UP38 647 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 RAP2CQ9Y3L5 183 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 HES2Q9Y543 173 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 COPG1Q9Y678 874 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TMEM233B4DJY2 109 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TK2O00142 265 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 PSMD11O00231 422 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 PHGDHO43175 533 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 RPS6KA4O75676 772 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SPRP35270 261 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 JAK3P52333 1124 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 NKX2-5P52952 324 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 ADAM17P78536 824 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 MERTKQ12866 999 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 STX5Q13190 355 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 IL31Q6EBC2 164 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 ABRAXAS1Q6UWZ7 409 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 B3GNT9Q6UX72 402 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SAMD3Q8N6K7 520 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TERB1Q8NA31 727 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 MCPH1Q8NEM0 835 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TRUB1Q8WWH5 349 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 RAD21L1Q9H4I0 556 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 NCKIPSDQ9NZQ3 722 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 COL20A1Q9P218 1284 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 ZDHHC2Q9UIJ5 367 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TCRBV5S1A1TA0A578 114 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DYTNA2CJ06 578 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 USP12O75317 370 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SRP72O76094 671 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 JUNP05412 331 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SLC7A1P30825 629 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 GBE1Q04446 702 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SF3B4Q15427 424 aaKnown RBP eCLIP7.75□□□□□ -1.172e-6■■■□□ 15.1
BRCA1-201ENST00000352993 ZIK1Q3SY52 487 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 CCDC14Q49A88 953 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 STXBP5Q5T5C0 1151 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 SAPCD2Q86UD0 394 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DHRSXQ8N5I4 330 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 PQLC3Q8N755 202 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 MCUQ8NE86 351 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 ACDQ96AP0 544 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 HEXIM2Q96MH2 286 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 DGCR6LQ9BY27 220 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 TDRD3Q9H7E2 651 aaKnown RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 ZBTB26Q9HCK0 441 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms