RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 MIF4GDA9UHW6 222 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 DFFAO00273 331 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ZSCAN12O43309 604 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ZNF500O60304 480 aaPredicted RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 FTCDO95954 541 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 MT-CO1P00395 513 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 SP9P0CG40 484 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 SERPINH1P50454 418 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 PAPOLAP51003 745 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 NRLP54845 237 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 PAFAH1B3Q15102 231 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 DLG2Q15700 870 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ACCSLQ4AC99 568 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 NCBP2-AS2Q69YL0 99 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 MFSD7Q6UXD7 560 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 LINGO4Q6UY18 593 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 PQLC3Q8N755 202 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 PRSS33Q8NF86 280 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 FRS2Q8WU20 508 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ALS2CR12Q96Q35 445 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 FBRSQ9HAH7 460 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 EBF1Q9UH73 591 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 CCDC163A0A0D9SF12 145 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 TARSL2A2RTX5 802 aaKnown RBP14.23□□□□□ -0.13
SEC13-202ENST00000350697 K7ERQ8 282 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 CDKN2BP42772 138 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 PEX5P50542 639 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 RWDD2BP57060 319 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 TAZQ16635 292 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 ANO7Q6IWH7 933 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 SPOCD1Q6ZMY3 1216 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 METTL3Q86U44 580 aaKnown RBP14.23□□□□□ -0.13
SEC13-202ENST00000350697 RASSF3Q86WH2 238 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 CCDC50Q8IVM0 306 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 UBL4BQ8N7F7 174 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 HMGB4Q8WW32 186 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 CASKIN2Q8WXE0 1202 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 NELL1Q92832 810 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 PTPRN2Q92932 1015 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 MTG2Q9H4K7 406 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 PRSS16Q9NQE7 514 aa14.23□□□□□ -0.13
SEC13-202ENST00000350697 NYNRINQ9P2P1 1898 aaKnown RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 APOL1O14791 398 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 SMAD6O43541 496 aaKnown RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 MFSD11O43934 449 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 PRAMEF11O60813 436 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 SIN3BO75182 1162 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 CD160O95971 181 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 ZFXP17010 805 aaPredicted RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 GABRG2P18507 467 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 PXNP49023 591 aaPredicted RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 COPAP53621 1224 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 COPS2P61201 443 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 TCF15Q12870 199 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 TFDP2Q14188 446 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 INO80DQ53TQ3 878 aaPredicted RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 TFDP3Q5H9I0 405 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 C9orf64Q5T6V5 341 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 HEATR6Q6AI08 1181 aaKnown RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 SLC9A4Q6AI14 798 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 RFX6Q8HWS3 928 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 LRRC49Q8IUZ0 686 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 TP53INP2Q8IXH6 220 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 NETO2Q8NC67 525 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 MDGA1Q8NFP4 955 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 TRIM58Q8NG06 486 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 OR2T3Q8NH03 318 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 ISG20Q96AZ6 181 aaKnown RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 ERLEC1Q96DZ1 483 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 CEP44Q9C0F1 390 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 MKRN2Q9H000 416 aaKnown RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 IRF2BPLQ9H1B7 796 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 SP110Q9HB58 689 aa14.22□□□□□ -0.13
SEC13-202ENST00000350697 BCCIPQ9P287 314 aaKnown RBP eCLIP14.22□□□□□ -0.13
SEC13-202ENST00000350697 IPO11Q9UI26 975 aaKnown RBP14.22□□□□□ -0.13
SEC13-202ENST00000350697 WDFY4Q6ZS81 3184 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 H0Y858 1186 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 J3KR12 359 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 AXIN1O15169 862 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 VAV1P15498 845 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 NDUFV2P19404 249 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 CETN2P41208 172 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 FNTBP49356 437 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 PTPN5P54829 565 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 IL10RBQ08334 325 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 DMWDQ09019 674 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 ELAVL3Q14576 367 aaKnown RBP14.21□□□□□ -0.13
SEC13-202ENST00000350697 PPP2R5EQ16537 467 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 C22orf39Q6P5X5 142 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 LEKR1Q6ZMV7 388 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 Q6ZVU0 165 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 WDR5BQ86VZ2 330 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 LONP2Q86WA8 852 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 TMPRSS6Q8IU80 811 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 REXO1L1PQ8IX06 675 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 PGBD3Q8N328 593 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 ATPAF2Q8N5M1 289 aa14.21□□□□□ -0.13
SEC13-202ENST00000350697 PCDH20Q8N6Y1 951 aaKnown RBP14.21□□□□□ -0.13
SEC13-202ENST00000350697 PLD5Q8N7P1 536 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms