RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TSPAN3O60637 253 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 KRT34O76011 436 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 TBX4P57082 545 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 MPP1Q00013 466 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 NOGQ13253 232 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 PTPRCAPQ14761 206 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 CHSY1Q86X52 802 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 RYBPQ8N488 228 aaPredicted RBP14.15□□□□□ -0.14
TRIM4-201ENST00000349062 GRAMD1AQ96CP6 724 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 SUSD3Q96L08 255 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 OXCT2Q9BYC2 517 aaPredicted RBP14.15□□□□□ -0.14
TRIM4-201ENST00000349062 CYLDQ9NQC7 956 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 ABCC13Q9NSE7 274 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 ARL8BQ9NVJ2 186 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 PRKAG3Q9UGI9 489 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 IPO11Q9UI26 975 aaKnown RBP14.15□□□□□ -0.14
TRIM4-201ENST00000349062 DNAJC16Q9Y2G8 782 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 MEI4A8MW99 385 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 DCTN3O75935 186 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 PRKCHP24723 683 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 NEK3P51956 506 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 USP4Q13107 963 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 PEX6Q13608 980 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 USP10Q14694 798 aaKnown RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 PAFAH1B3Q15102 231 aaKnown RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ANKRD20A4Q4UJ75 823 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ESRP1Q6NXG1 681 aaKnown RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 CRLF3Q8IUI8 442 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 EFCAB3Q8N7B9 438 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ZNF419Q96HQ0 510 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 NMUR2Q9GZQ4 415 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 CRISPLD1Q9H336 500 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 LRRC40Q9H9A6 602 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 SP110Q9HB58 689 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 HS3ST4Q9Y661 456 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 CDY1Q9Y6F8 540 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 FAM159BA6NKW6 160 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 E9PAM4 449 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ZNF623O75123 536 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ALDH2P05091 517 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 GLUD2P49448 558 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 KLC1Q07866 573 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 LIMS2Q7Z4I7 341 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 CCNYL1Q8N7R7 359 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ZSCAN18Q8TBC5 510 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 AUTS2Q8WXX7 1259 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 DENND2DQ9H6A0 471 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 SNX15Q9NRS6 342 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 PNPOQ9NVS9 261 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 UBTFL6P0CB48 400 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ZCCHC18P0CG32 403 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ESRRAP11474 423 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 CD86P42081 329 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 KCNQ1P51787 676 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 UBAP2LQ14157 1087 aaKnown RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 RAB41Q5JT25 222 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 ITPRIPL1Q6GPH6 555 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 FSTL4Q6MZW2 842 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 FAM171BQ6P995 826 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 RSPO2Q6UXX9 243 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 LRRC8DQ7L1W4 858 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 PTAR1Q7Z6K3 402 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 MRPL10Q7Z7H8 261 aaKnown RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 PPP4R1Q8TF05 950 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 FAM124BQ9H5Z6 455 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-201ENST00000349062 TASP1Q9H6P5 420 aa14.14□□□□□ -0.15
TRIM4-201ENST00000349062 A0A096LPK6 155 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 A0A0U1RQS6 177 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 PEX11AO75192 247 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 ZMPSTE24O75844 475 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 AP2A1O95782 977 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 BAG2O95816 211 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 HAPLN1P10915 354 aaPredicted RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 RASSF2P50749 326 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 MPP3Q13368 585 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 RCN1Q15293 331 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 CFAP157Q5JU67 520 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 RNF19BQ6ZMZ0 732 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 SLC41A1Q8IVJ1 513 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 NUP93Q8N1F7 819 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 HIPK4Q8NE63 616 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 KANSL3Q9P2N6 904 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 PACSIN3Q9UKS6 424 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 FCHO1O14526 889 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 ADAM12O43184 909 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 HLA-DQB2P05538 268 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 TPBGLP0DKB5 382 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 ETV4P43268 484 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 RPL34P49207 117 aaKnown RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 PLK1P53350 603 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 PPIDQ08752 370 aaKnown RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 DSC3Q14574 896 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 NAT14Q8WUY8 206 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 STMN2Q93045 179 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 PSMG2Q969U7 264 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 TEKT5Q96M29 485 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 CYP4F11Q9HBI6 524 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms