RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ZNF541Q9H0D2 1346 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 EXTL3O43909 919 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 PRPSAP2O60256 369 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 ICAM1P05362 532 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 TSHRP16473 764 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 PPP1R8Q12972 351 aaKnown RBP15.42■□□□□ 0.06
PTBP1-201ENST00000349038 ADRM1Q16186 407 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 SNRNP48Q6IEG0 339 aaKnown RBP15.42■□□□□ 0.06
PTBP1-201ENST00000349038 SEPHS2Q99611 448 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 ING2Q9H160 280 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 PRDM16Q9HAZ2 1276 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 SMOXQ9NWM0 555 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 CDY2AQ9Y6F7 541 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 CDY1Q9Y6F8 540 aa15.42■□□□□ 0.06
PTBP1-201ENST00000349038 C3orf70A6NLC5 250 aaPredicted RBP15.41■□□□□ 0.06
PTBP1-201ENST00000349038 PTGES3LE9PB15 166 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 GPC4O75487 556 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 PDGFRAP16234 1089 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 PTGER2P43116 358 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 PSME3P61289 254 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 PLIN5Q00G26 463 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 TIGD2Q4W5G0 525 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 TBCELQ5QJ74 424 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 CHSY3Q70JA7 882 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 LYSMD3Q7Z3D4 306 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 PIGZQ86VD9 579 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 IGFN1Q86VF2 1251 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 DNAAF3Q8N9W5 541 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 STARD8Q92502 1023 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 SGCDQ92629 289 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 CEP295NLQ96MC4 621 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 AGAP2Q99490 1192 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 CDH19Q9H159 772 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 FANCEQ9HB96 536 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 CYP2C9P11712 490 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 GRK2P25098 689 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 TNFSF9P41273 254 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 HSPA13P48723 471 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 DGKZQ13574 1117 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 ZNF460Q14592 562 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 SWSAP1Q6NVH7 229 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 ARCQ7LC44 396 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 PNPLA1Q8N8W4 532 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 RXFP2Q8WXD0 754 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 CPXM1Q96SM3 734 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 ILKAPQ9H0C8 392 aaPredicted RBP15.41■□□□□ 0.06
PTBP1-201ENST00000349038 HIPK3Q9H422 1215 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 GIN1Q9NXP7 522 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 FBXO40Q9UH90 709 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 SORCS3Q9UPU3 1222 aa15.41■□□□□ 0.06
PTBP1-201ENST00000349038 GBE1Q04446 702 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 POU5F1BQ06416 359 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 IMPG1Q17R60 797 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 ARL13AQ5H913 290 aaPredicted RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 HABP4Q5JVS0 413 aaKnown RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 ZFP1Q6P2D0 407 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 KDELC2Q7Z4H8 507 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 SPPL2CQ8IUH8 684 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PIWIL1Q96J94 861 aaKnown RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PRMT6Q96LA8 375 aaPredicted RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 GATA5Q9BWX5 397 aaPredicted RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 NUDT5Q9UKK9 219 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 XYLBO75191 536 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 TPH1P17752 444 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 CCNA2P20248 432 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 SFNP31947 248 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 ATXN1P54253 815 aaKnown RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 SLC13A2Q13183 592 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 KCNJ11Q14654 390 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 FUT11Q495W5 492 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PIGGQ5H8A4 983 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PQLC3Q8N755 202 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 TMEM102Q8N9M5 508 aaPredicted RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 IRGQQ8WZA9 623 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 CCDC138Q96M89 665 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PLAC1Q9HBJ0 212 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PLK2Q9NYY3 685 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 UBP1Q9NZI7 540 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 PAK5Q9P286 719 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 A0A096LPK6 155 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 TNPO2O14787 897 aaKnown RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 ELK4P28324 431 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 ZNF132P52740 706 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 ZBED5Q49AG3 693 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 WDR78Q5VTH9 848 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 TMC5Q6UXY8 1006 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 VASH1Q7L8A9 365 aaPredicted RBP15.4■□□□□ 0.06
PTBP1-201ENST00000349038 CADM3Q8N126 398 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 NIPA2Q8N8Q9 360 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 EXT2Q93063 718 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.4■□□□□ 0.068e-7■□□□□ 10.9
PTBP1-201ENST00000349038 GIT1Q9Y2X7 761 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 MFHAS1Q9Y4C4 1052 aa15.4■□□□□ 0.06
PTBP1-201ENST00000349038 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
PTBP1-201ENST00000349038 SPAG6O75602 509 aa15.39■□□□□ 0.05
PTBP1-201ENST00000349038 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
PTBP1-201ENST00000349038 CES1P23141 567 aa15.39■□□□□ 0.05
PTBP1-201ENST00000349038 NUMBP49757 651 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms