RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 CLK3P49761 638 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 LRP8Q14114 963 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 TFDP3Q5H9I0 405 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 RXFP2Q8WXD0 754 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 PPP1R2P1Q96PQ5 205 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 HEPHQ9BQS7 1158 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 TOR3AQ9H497 397 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 YES1P07947 543 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 MFSD10Q14728 455 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 RIPOR1Q6ZS17 1223 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF571Q7Z3V5 609 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 TFAP2DQ7Z6R9 452 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 SLCO6A1Q86UG4 719 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ZSWIM2Q8NEG5 633 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 PLEKHO2Q8TD55 490 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 HELQQ8TDG4 1101 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 STARD8Q92502 1023 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM105AQ9NUU6 356 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 PIH1D1Q9NWS0 290 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ACSL4O60488 711 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 FDFT1P37268 417 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 GALNTL6Q49A17 601 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF57Q68EA5 555 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 SYCE2Q6PIF2 218 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 P3H2Q8IVL5 708 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM13CQ8NE31 585 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ARHGEF3Q9NR81 526 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 VPS45Q9NRW7 570 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ALDH2P05091 517 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 RHOCP08134 193 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 GP5P40197 560 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 EPHB3P54753 998 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 KCNK10P57789 538 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 FBXO47Q5MNV8 452 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 C11orf63Q6NUN7 778 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 KRT77Q7Z794 578 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 PALB2Q86YC2 1186 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 ADAM32Q8TC27 787 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 DLG3Q92796 817 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 SMPD4Q9NXE4 827 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 MEI4A8MW99 385 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CLDN25C9JDP6 229 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 H7C2Y5 167 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SUPT7LO94864 414 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CDK16Q00536 496 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SLC45A4Q5BKX6 768 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PPM1LQ5SGD2 360 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SV2AQ7L0J3 742 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CACUL1Q86Y37 369 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 MIER2Q8N344 545 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PIK3C3Q8NEB9 887 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 DNERQ8NFT8 737 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 MED30Q96HR3 178 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 POLR1BQ9H9Y6 1135 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 JCHAINP01591 159 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF23P17027 643 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CENPAP49450 140 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 NDST1P52848 882 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PTPN11Q06124 597 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 HERC3Q15034 1050 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 EIF3MQ7L2H7 374 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 DMRTB1Q96MA1 342 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 DNAJC7Q99615 494 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 OSBPL11Q9BXB4 747 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 EGFRP00533 1210 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 NTRK1P04629 796 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CKBP12277 381 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 DSTNP60981 165 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 RHOAP61586 193 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SMCO1Q147U7 214 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM83EQ2M2I3 478 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 RBM43Q6ZSC3 357 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 DEFB107AQ8IZN7 70 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CYTH4Q9UIA0 394 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PLAGL2Q9UPG8 496 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PCDHAC2Q9Y5I4 1007 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PPP2R3BQ9Y5P8 575 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PSIP1O75475 530 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 LHX1P48742 406 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SULT2A1Q06520 285 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PWP1Q13610 501 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 NTRK3Q16288 839 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 FAR1Q8WVX9 515 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 ZBTB45Q96K62 511 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SMAD5Q99717 465 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 MTG1Q9BT17 334 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 COPS7BQ9H9Q2 264 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CAB39LQ9H9S4 337 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 XPNPEP3Q9NQH7 507 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM92AA1XBS5 289 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 EIF3FO00303 357 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PRKD3O94806 890 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms