RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ADIPOR2Q86V24 386 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 TEX26Q8N6G2 289 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 MYRIPQ8NFW9 859 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 TTC8Q8TAM2 541 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 ACDQ96AP0 544 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 SPATA13Q96N96 652 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 VAT1Q99536 393 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 RHOXF2Q9BQY4 288 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 ERP44Q9BS26 406 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 C2orf49Q9BVC5 232 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-202ENST00000348495 SEPT10Q9P0V9 454 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.61■■■□□ 2.01
SSBP4-202ENST00000348495 V9GYY5 206 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-202ENST00000348495 COL4A2P08572 1712 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 RPL22P35268 128 aaKnown RBP27.61■■■□□ 2.01
SSBP4-202ENST00000348495 OPRD1P41143 372 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 SLC6A11P48066 632 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 ERCC6LQ2NKX8 1250 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 PHTF2Q8N3S3 785 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 CCDC110Q8TBZ0 833 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 SEC14L1Q92503 715 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 CXorf51AA0A1B0GTR3 108 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 HEXIM1O94992 359 aaKnown RBP27.6■■■□□ 2.01
SSBP4-202ENST00000348495 CD160O95971 181 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 JCHAINP01591 159 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 ASGR2P07307 311 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 SLC10A7Q0GE19 358 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 ANKRD20A2Q5SQ80 823 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 ANKRD20A1Q5TYW2 823 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 ANKRD20A3Q5VUR7 823 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 AHI1Q8N157 1196 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 ZNF567Q8N184 647 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 CEP41Q9BYV8 373 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 ANKZF1Q9H8Y5 726 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 TICRRQ7Z2Z1 1910 aa27.6■■■□□ 2.01
SSBP4-202ENST00000348495 ZSCAN5CA6NGD5 496 aaPredicted RBP27.59■■■□□ 2.01
SSBP4-202ENST00000348495 OPHN1O60890 802 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 STK10O94804 968 aaKnown RBP27.59■■■□□ 2.01
SSBP4-202ENST00000348495 IVDP26440 423 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 GEN1Q17RS7 908 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 TMCO4Q5TGY1 634 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 TMEM215Q68D42 235 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 DUPD1Q68J44 220 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 CNTD1Q8N815 330 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 CCHCR1Q8TD31 782 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 TEKT5Q96M29 485 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 RAB17Q9H0T7 212 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 DEC1Q9P2X7 70 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 TRHDEQ9UKU6 1024 aa27.59■■■□□ 2.01
SSBP4-202ENST00000348495 TARSL2A2RTX5 802 aaKnown RBP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 CTIFO43310 598 aaKnown RBP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 EIF2DP41214 584 aaKnown RBP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 RENBPP51606 427 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 MESP2Q0VG99 397 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 LEKR1Q6ZMV7 388 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 EPC1Q9H2F5 836 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 PAK5Q9P286 719 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 THEGQ9P2T0 379 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 UBA2Q9UBT2 640 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 UTP11Q9Y3A2 253 aaKnown RBP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 ACTL7AQ9Y615 435 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 RFTN1Q14699 578 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 MARC1Q5VT66 337 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 NAIF1Q69YI7 327 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 ADHFE1Q8IWW8 467 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 CSGALNACT1Q8TDX6 532 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 WFIKKN2Q8TEU8 576 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 NSMCE1Q8WV22 266 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 TTC17Q96AE7 1141 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 RBM22Q9NW64 420 aaKnown RBP eCLIP27.58■■■□□ 2.01
SSBP4-202ENST00000348495 PRKAG3Q9UGI9 489 aa27.58■■■□□ 2.01
SSBP4-202ENST00000348495 LBRQ14739 615 aaKnown RBP27.57■■■□□ 2
SSBP4-202ENST00000348495 NAA30Q147X3 362 aaPredicted RBP27.57■■■□□ 2
SSBP4-202ENST00000348495 GRAMD4Q6IC98 578 aa27.57■■■□□ 2
SSBP4-202ENST00000348495 RETSATQ6NUM9 610 aa27.57■■■□□ 2
SSBP4-202ENST00000348495 LINGO4Q6UY18 593 aa27.57■■■□□ 2
SSBP4-202ENST00000348495 USP33Q8TEY7 942 aa27.57■■■□□ 2
SSBP4-202ENST00000348495 DNASE1L2Q92874 299 aa27.57■■■□□ 2
SSBP4-202ENST00000348495 HINFPQ9BQA5 517 aa27.57■■■□□ 2
SSBP4-202ENST00000348495 ASIC3Q9UHC3 531 aa27.57■■■□□ 2
SSBP4-202ENST00000348495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.56■■■□□ 2
SSBP4-202ENST00000348495 ZBTB24O43167 697 aaPredicted RBP27.56■■■□□ 2
SSBP4-202ENST00000348495 CD68P34810 354 aaPredicted RBP27.56■■■□□ 2
SSBP4-202ENST00000348495 MMP13P45452 471 aa27.56■■■□□ 2
SSBP4-202ENST00000348495 VPS41P49754 854 aa27.56■■■□□ 2
SSBP4-202ENST00000348495 DRG2P55039 364 aaKnown RBP27.56■■■□□ 2
SSBP4-202ENST00000348495 GUCY2DQ02846 1103 aa27.56■■■□□ 2
SSBP4-202ENST00000348495 GPS1Q13098 491 aa27.56■■■□□ 2
SSBP4-202ENST00000348495 INO80DQ53TQ3 878 aaPredicted RBP27.56■■■□□ 2
SSBP4-202ENST00000348495 MBLAC2Q68D91 279 aa27.56■■■□□ 2
SSBP4-202ENST00000348495 C4orf22Q6V702 233 aa27.56■■■□□ 2
SSBP4-202ENST00000348495 AGAP3Q96P47 875 aa27.56■■■□□ 2
SSBP4-202ENST00000348495 KLHL8Q9P2G9 620 aaPredicted RBP27.56■■■□□ 2
SSBP4-202ENST00000348495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.55■■■□□ 2
SSBP4-202ENST00000348495 MT-CO1P00395 513 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 HLA-DQB2P05538 268 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 ACTN2P35609 894 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 ZP2Q05996 745 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 SULT2A1Q06520 285 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 TRADDQ15628 312 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms