RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PIP4K2CQ8TBX8 421 aa13.61□□□□□ -0.23
CLCC1-202ENST00000348264 FAM172AQ8WUF8 416 aa13.61□□□□□ -0.23
CLCC1-202ENST00000348264 BAP1Q92560 729 aa13.61□□□□□ -0.23
CLCC1-202ENST00000348264 CENPIQ92674 756 aaPredicted RBP13.61□□□□□ -0.23
CLCC1-202ENST00000348264 SYT11Q9BT88 431 aa13.61□□□□□ -0.23
CLCC1-202ENST00000348264 FUCA2Q9BTY2 467 aa13.61□□□□□ -0.23
CLCC1-202ENST00000348264 SELENOOQ9BVL4 669 aa13.61□□□□□ -0.23
CLCC1-202ENST00000348264 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
CLCC1-202ENST00000348264 TM7SF3Q9NS93 570 aa13.61□□□□□ -0.23
CLCC1-202ENST00000348264 PPARGC1AQ9UBK2 798 aaKnown RBP13.61□□□□□ -0.23
CLCC1-202ENST00000348264 ARID1BQ8NFD5 2236 aaPredicted RBP13.61□□□□□ -0.23
CLCC1-202ENST00000348264 C1QTNF3-AMACRE9PGA6 284 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 RNF103O00237 685 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 CBX4O00257 560 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 WNT9AO14904 365 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 CCP110O43303 1012 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 PLRG1O43660 514 aaKnown RBP13.6□□□□□ -0.23
CLCC1-202ENST00000348264 CBFA2T3O75081 653 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 ZMPSTE24O75844 475 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 WNT1P04628 370 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 FERP16591 822 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 GPD1P21695 349 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 CTSKP43235 329 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 CCR5P51681 352 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 RACK1P63244 317 aaKnown RBP13.6□□□□□ -0.23
CLCC1-202ENST00000348264 NRG1Q02297 640 aaPredicted RBP13.6□□□□□ -0.23
CLCC1-202ENST00000348264 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
CLCC1-202ENST00000348264 ARL13BQ3SXY8 428 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 FAM46CQ5VWP2 391 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 E4F1Q66K89 784 aaPredicted RBP13.6□□□□□ -0.23
CLCC1-202ENST00000348264 DNAJC24Q6P3W2 148 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 ZNF783Q6ZMS7 281 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 IRF2BP2Q7Z5L9 587 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 ADAT2Q7Z6V5 191 aaKnown RBP13.6□□□□□ -0.23
CLCC1-202ENST00000348264 NLRP14Q86W24 1093 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 CHST14Q8NCH0 376 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 OR2A12Q8NGT7 310 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 MCEEQ96PE7 176 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 TNKS2Q9H2K2 1166 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 ATP13A1Q9HD20 1204 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 NDFIP2Q9NV92 336 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 TAS2R14Q9NYV8 317 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 OR12D3Q9UGF7 316 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 FREM2Q5SZK8 3169 aa13.6□□□□□ -0.23
CLCC1-202ENST00000348264 CFAP47Q6ZTR5 3102 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 LRRC53A6NM62 1247 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 SIGLEC16A6NMB1 481 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 H0Y8X5 98 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 KCNK3O14649 394 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 SLC7A4O43246 635 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 LATO43561 262 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 HYAL3O43820 417 aaPredicted RBP13.59□□□□□ -0.23
CLCC1-202ENST00000348264 ZNF821O75541 412 aaPredicted RBP13.59□□□□□ -0.23
CLCC1-202ENST00000348264 LRIG2O94898 1065 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 ZNF165P49910 485 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 SERPINH1P50454 418 aaKnown RBP13.59□□□□□ -0.23
CLCC1-202ENST00000348264 CLCN6P51797 869 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 RPL7AP62424 266 aaKnown RBP13.59□□□□□ -0.23
CLCC1-202ENST00000348264 ARF5P84085 180 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 GNA12Q03113 381 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 IQCB1Q15051 598 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 TRIP6Q15654 476 aaKnown RBP13.59□□□□□ -0.23
CLCC1-202ENST00000348264 RWDD4Q6NW29 188 aaKnown RBP13.59□□□□□ -0.23
CLCC1-202ENST00000348264 BAHD1Q8TBE0 780 aaPredicted RBP13.59□□□□□ -0.23
CLCC1-202ENST00000348264 NTAN1Q96AB6 310 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 SPON2Q9BUD6 331 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 SCNM1Q9BWG6 230 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 OSBPL2Q9H1P3 480 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 PCOLCE2Q9UKZ9 415 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 MYO6Q9UM54 1294 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 BTBD3Q9Y2F9 522 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 ACTL7AQ9Y615 435 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 PTPRBP23467 1997 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
CLCC1-202ENST00000348264 TBC1D3DA0A087WVF3 549 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3IA0A087WXS9 549 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3EA0A087X179 549 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3KA0A087X1G2 549 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 A0A1W2PR77 199 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3FA6NER0 549 aaPredicted RBP13.58□□□□□ -0.24
CLCC1-202ENST00000348264 SMTNL1A8MU46 457 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3LB9A6J9 549 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 VILLO15195 856 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 PLEKP08567 350 aaPredicted RBP13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3HP0C7X1 549 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 CHRNA3P32297 505 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 ACVRL1P37023 503 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 MAPKAPK2P49137 400 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 CCT8P50990 548 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 ZNF143P52747 638 aaPredicted RBP13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TAS2R38P59533 333 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 IL9RQ01113 521 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 SCAPQ12770 1279 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 HNRNPDQ14103 355 aaKnown RBP13.58□□□□□ -0.24
CLCC1-202ENST00000348264 ZNF423Q2M1K9 1284 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 PPP1R15BQ5SWA1 713 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 PIP5KL1Q5T9C9 394 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3GQ6DHY5 549 aa13.58□□□□□ -0.24
CLCC1-202ENST00000348264 TBC1D3CQ6IPX1 549 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms