RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 IP6K2Q9UHH9 426 aa10.03□□□□□ -0.8
MRPL55-204ENST00000348259 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.03□□□□□ -0.8
MRPL55-204ENST00000348259 SNX11Q9Y5W9 270 aa10.03□□□□□ -0.8
MRPL55-204ENST00000348259 USP3Q9Y6I4 520 aa10.03□□□□□ -0.8
MRPL55-204ENST00000348259 UBR5O95071 2799 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 PGRMC1O00264 195 aaKnown RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ZBTB24O43167 697 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 TSPAN3O60637 253 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 PLA2G2AP14555 144 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 H2AFXP16104 143 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 MCM3P25205 808 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ITPKBP27987 946 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 CXCR5P32302 372 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ACSL1P33121 698 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 GRK6P43250 576 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 AFF3P51826 1226 aaKnown RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 NAA30Q147X3 362 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 STARD3Q14849 445 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 EIF4HQ15056 248 aaKnown RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 PPP2R5EQ16537 467 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 LRRC38Q5VT99 294 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 CCDC70Q6NSX1 233 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 WDR93Q6P2C0 686 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 KIAA0907Q7Z7F0 614 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 TMEM110Q86TL2 294 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ACOT1Q86TX2 421 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ZDHHC17Q8IUH5 632 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 C12orf29Q8N999 325 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ANKRD52Q8NB46 1076 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 SLC35F5Q8WV83 523 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 IGSF8Q969P0 613 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 CAPZA3Q96KX2 299 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 HNRNPABQ99729 332 aaKnown RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 MIR1-1HGQ9H1L0 117 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 TMEM245Q9H330 911 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 GOLPH3Q9H4A6 298 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 TM9SF3Q9HD45 589 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ELOVL2Q9NXB9 296 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 LSM7Q9UK45 103 aaKnown RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 NUDT5Q9UKK9 219 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 RAB21Q9UL25 225 aa10.02□□□□□ -0.81
MRPL55-204ENST00000348259 PACSIN2Q9UNF0 486 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 COL27A1Q8IZC6 1860 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-204ENST00000348259 A0A1W2PQH9 124 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 H0Y8X5 98 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 CCDC188H7C350 402 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PSTPIP1O43586 416 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 CEP104O60308 925 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 RARGP13631 454 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 SCNN1AP37088 669 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 EIF2S3P41091 472 aaKnown RBP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 ABCG1P45844 678 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 RWDD2BP57060 319 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 MAP3K7CLP57077 242 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PDE4CQ08493 712 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PDCLQ13371 301 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 ORC1Q13415 861 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PIGHQ14442 188 aaPredicted RBP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 RTP5Q14D33 572 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 SHBQ15464 509 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PTPN20Q4JDL3 420 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 TEX35Q5T0J7 233 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PPP1R26Q5T8A7 1209 aaPredicted RBP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 DNAJC24Q6P3W2 148 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 DHRS13Q6UX07 377 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 ARCQ7LC44 396 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 ANKS1BQ7Z6G8 1248 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 MTERF4Q7Z6M4 381 aaKnown RBP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 TMPRSS12Q86WS5 348 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 XYLT1Q86Y38 959 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 CPXM2Q8N436 756 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 NOA1Q8NC60 698 aaKnown RBP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 OR2T3Q8NH03 318 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 SNIP1Q8TAD8 396 aaKnown RBP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 SLC39A7Q92504 469 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 TSC1Q92574 1164 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 ALG3Q92685 438 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PRCCQ92733 491 aaPredicted RBP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 CPXM1Q96SM3 734 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 MED10Q9BTT4 135 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 ANKZF1Q9H8Y5 726 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 CLIC5Q9NZA1 410 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 HESX1Q9UBX0 185 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 CYTH4Q9UIA0 394 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 TSPAN16Q9UKR8 245 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 ANKRD6Q9Y2G4 727 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PCDHGA1Q9Y5H4 931 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 SPTA1P02549 2419 aa10.01□□□□□ -0.81
MRPL55-204ENST00000348259 PTPN13Q12923 2485 aa10□□□□□ -0.81
MRPL55-204ENST00000348259 BOD1L1Q8NFC6 3051 aa10□□□□□ -0.81
MRPL55-204ENST00000348259 A0A1B0GTQ1 180 aa10□□□□□ -0.81
MRPL55-204ENST00000348259 M0QYV0 167 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms