RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ZNF599Q96NL3 588 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 MLPHQ9BV36 600 aaPredicted RBP19.03■□□□□ 0.64
PTN-201ENST00000348225 PRKD2Q9BZL6 878 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 NKX2-4Q9H2Z4 354 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 TASP1Q9H6P5 420 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 CERS4Q9HA82 394 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 ZC3H7BQ9UGR2 993 aaKnown RBP19.03■□□□□ 0.64
PTN-201ENST00000348225 CHD5Q8TDI0 1954 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 SDR42E2A6NKP2 422 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 PRAMEF11O60813 436 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 CDH16O75309 829 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 AGTP01019 485 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 ACVRL1P37023 503 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 GRIA1P42261 906 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 MMP13P45452 471 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 SGSHP51688 502 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 GEMP55040 296 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 ZXDBP98169 803 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 TNK2Q07912 1038 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 STXBP5Q5T5C0 1151 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 TMCO4Q5TGY1 634 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 ZNF783Q6ZMS7 281 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 OTOP3Q7RTS5 596 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 LINC00523Q86TU6 105 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 RBM23Q86U06 439 aaKnown RBP19.03■□□□□ 0.64
PTN-201ENST00000348225 CCNJLQ8IV13 435 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 IGDCC3Q8IVU1 814 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 TEX26Q8N6G2 289 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 SIGLEC10Q96LC7 697 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 EBNA1BP2Q99848 306 aaKnown RBP19.03■□□□□ 0.64
PTN-201ENST00000348225 TLE6Q9H808 572 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 FETUBQ9UGM5 382 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 NOVA2Q9UNW9 492 aaKnown RBP19.03■□□□□ 0.64
PTN-201ENST00000348225 TBC1D30Q9Y2I9 924 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 MAD1L1Q9Y6D9 718 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 LEFTY2O00292 366 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 ZNF197O14709 1029 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 TBL1XO60907 577 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 STX2P32856 288 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 TEAD2Q15562 447 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 IL31Q6EBC2 164 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 AGGF1Q8N302 714 aaeCLIP19.02■□□□□ 0.64
PTN-201ENST00000348225 BBS5Q8N3I7 341 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 CPXM2Q8N436 756 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 SH2D3CQ8N5H7 860 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 TTC16Q8NEE8 873 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 FBF1Q8TES7 1133 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 ARNTL2Q8WYA1 636 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 TMA16Q96EY4 203 aaKnown RBP19.02■□□□□ 0.64
PTN-201ENST00000348225 STAMBPL1Q96FJ0 436 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 CFAP36Q96G28 342 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 NAT9Q9BTE0 207 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 ACSS3Q9H6R3 686 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 SLC24A2Q9UI40 661 aa19.02■□□□□ 0.64
PTN-201ENST00000348225 CCDC195A0A1B0GUA6 201 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 GFRA2O00451 464 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 OXCT1P55809 520 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 SESN2P58004 480 aaPredicted RBP19.01■□□□□ 0.63
PTN-201ENST00000348225 SPARCL1Q14515 664 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 LBRQ14739 615 aaKnown RBP19.01■□□□□ 0.63
PTN-201ENST00000348225 ADGRD2Q7Z7M1 963 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 TDRPQ86YL5 185 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 CMTM8Q8IZV2 173 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 DNAAF3Q8N9W5 541 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 TLCD1Q96CP7 247 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 TCEAL4Q96EI5 215 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 OXNAD1Q96HP4 312 aaPredicted RBP19.01■□□□□ 0.63
PTN-201ENST00000348225 ZNF419Q96HQ0 510 aaPredicted RBP19.01■□□□□ 0.63
PTN-201ENST00000348225 GDF15Q99988 308 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 SLC25A51Q9H1U9 297 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 NT5MQ9NPB1 228 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 CASS4Q9NQ75 786 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 LGALS13Q9UHV8 139 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 RABGEF1Q9UJ41 708 aa19.01■□□□□ 0.63
PTN-201ENST00000348225 A0A0D9SEW6 157 aa19■□□□□ 0.63
PTN-201ENST00000348225 E2F8A0AVK6 867 aa19■□□□□ 0.63
PTN-201ENST00000348225 H0Y626 953 aa19■□□□□ 0.63
PTN-201ENST00000348225 NRG2O14511 850 aaPredicted RBP19■□□□□ 0.63
PTN-201ENST00000348225 KDELR3O43731 214 aa19■□□□□ 0.63
PTN-201ENST00000348225 MOSPD3O75425 235 aa19■□□□□ 0.63
PTN-201ENST00000348225 NR1D1P20393 614 aa19■□□□□ 0.63
PTN-201ENST00000348225 SLC10A7Q0GE19 358 aa19■□□□□ 0.63
PTN-201ENST00000348225 DUSP6Q16828 381 aa19■□□□□ 0.63
PTN-201ENST00000348225 SKIDA1Q1XH10 827 aa19■□□□□ 0.63
PTN-201ENST00000348225 ZNF697Q5TEC3 545 aa19■□□□□ 0.63
PTN-201ENST00000348225 CASC4Q6P4E1 433 aa19■□□□□ 0.63
PTN-201ENST00000348225 GRASPQ7Z6J2 395 aaPredicted RBP19■□□□□ 0.63
PTN-201ENST00000348225 ARFGAP2Q8N6H7 521 aa19■□□□□ 0.63
PTN-201ENST00000348225 OR7D4Q8NG98 312 aa19■□□□□ 0.63
PTN-201ENST00000348225 OR52K1Q8NGK4 314 aa19■□□□□ 0.63
PTN-201ENST00000348225 CYTH2Q99418 400 aa19■□□□□ 0.63
PTN-201ENST00000348225 SPON2Q9BUD6 331 aa19■□□□□ 0.63
PTN-201ENST00000348225 SLC28A3Q9HAS3 691 aa19■□□□□ 0.63
PTN-201ENST00000348225 PIDD1Q9HB75 910 aa19■□□□□ 0.63
PTN-201ENST00000348225 PDFQ9HBH1 243 aa19■□□□□ 0.63
PTN-201ENST00000348225 ATP13A1Q9HD20 1204 aa19■□□□□ 0.63
PTN-201ENST00000348225 BFARQ9NZS9 450 aa19■□□□□ 0.63
PTN-201ENST00000348225 ATG2AQ2TAZ0 1938 aa19■□□□□ 0.63
PTN-201ENST00000348225 POC1B-GALNT4F8VUJ3 575 aa19■□□□□ 0.63
PTN-201ENST00000348225 SCAMP3O14828 347 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms