RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HARS2P49590 506 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 RASSF2P50749 326 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 EPHB1P54762 984 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ABCE1P61221 599 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MS4A2Q01362 244 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PPIDQ08752 370 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 EFHC1Q5JVL4 640 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 THEMIS2Q5TEJ8 643 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 IQSEC1Q6DN90 963 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TMEM154Q6P9G4 183 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 FBXL19Q6PCT2 694 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PLEKHH3Q7Z736 793 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF467Q7Z7K2 595 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PSTKQ8IV42 348 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SLC41A1Q8IVJ1 513 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 FAM156AQ8NDB6 213 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 KCTD4Q8WVF5 259 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MCUR1Q96AQ8 359 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 LENG8Q96PV6 779 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SMIM14Q96QK8 99 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TUBGCP5Q96RT8 1024 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PKMYT1Q99640 499 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SIK2Q9H0K1 926 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 NMUR1Q9HB89 426 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MPP6Q9NZW5 540 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 KLHL8Q9P2G9 620 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 A0A1B0GTW7 788 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MAGEC1O60732 1142 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 NEBLO76041 1014 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 LRPAP1P30533 357 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 HOXC8P31273 242 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SERPINB5P36952 375 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GARSP41250 739 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PURAQ00577 322 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 POU6F1Q14863 301 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 NAIF1Q69YI7 327 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PAOXQ6QHF9 649 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 EPGNQ6UW88 154 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 CXCL17Q6UXB2 119 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TTC9BQ8N6N2 239 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SMC1BQ8NDV3 1235 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 URGCPQ8TCY9 931 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 KCTD13Q8WZ19 329 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PMM1Q92871 262 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MTBPQ96DY7 904 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SGF29Q96ES7 293 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 NOL6Q9H6R4 1146 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 DLGAP2Q9P1A6 1054 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 DOCK4Q8N1I0 1966 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 ANKRD12Q6UB98 2062 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 MIA3Q5JRA6 1907 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 A0A0U1RQS6 177 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 STRNO43815 780 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 OPHN1O60890 802 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 MLNP12872 115 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 CPA3P15088 417 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 ALOX15P16050 662 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-201ENST00000347613 ACADSP16219 412 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 NCF2P19878 526 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-201ENST00000347613 VHLP40337 213 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 ARCN1P48444 511 aaKnown RBP6.15□□□□□ -1.42
CLCN3-201ENST00000347613 GPR162Q16538 588 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 UPP1Q16831 310 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 RBM20Q5T481 1227 aaKnown RBP6.15□□□□□ -1.42
CLCN3-201ENST00000347613 ATG16L1Q676U5 607 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 PDPK2PQ6A1A2 396 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 TMEM207Q6UWW9 146 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 KYAT3Q6YP21 454 aaKnown RBP6.15□□□□□ -1.42
CLCN3-201ENST00000347613 CASP10Q92851 521 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 MYLPFQ96A32 169 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 ISL2Q96A47 359 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 SLC39A8Q9C0K1 460 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 ZCWPW1Q9H0M4 648 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 HCSTQ9UBK5 93 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 SLC39A10Q9ULF5 831 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 CDY2AQ9Y6F7 541 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 MYO16Q9Y6X6 1858 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 VWA8A3KMH1 1905 aa6.15□□□□□ -1.42
CLCN3-201ENST00000347613 PPP6CO00743 305 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 SOAT2O75908 522 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 BAG2O95816 211 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 SPATA31D3P0C874 917 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 PRSS56P0CW18 603 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 TSPAN8P19075 237 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 PEX2P28328 305 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 FDFT1P37268 417 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 LIMK2P53671 638 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 BTKQ06187 659 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 GALNT2Q10471 571 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 CDC16Q13042 620 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 PTPRRQ15256 657 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 CAPRIN2Q6IMN6 1127 aaKnown RBP6.15□□□□□ -1.43
CLCN3-201ENST00000347613 IZUMO2Q6UXV1 221 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 CYHR1Q6ZMK1 362 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 SPATA31D4Q6ZUB0 917 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 SCD5Q86SK9 330 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 KCNMB4Q86W47 210 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 DEFB107AQ8IZN7 70 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 TOP6BLQ8N6T0 577 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 DNAAF3Q8N9W5 541 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms