RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 HERVK_113Q902F9 699 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 NAT9Q9BTE0 207 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 IL1RL2Q9HB29 575 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 AURKCQ9UQB9 309 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 HBS1LQ9Y450 684 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 KPNA5O15131 536 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 PAEPP09466 180 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 CALB2P22676 271 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 COPAP53621 1224 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 MRPS35P82673 323 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 AGAP9Q5VTM2 703 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 SNX30Q5VWJ9 437 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 PAWRQ96IZ0 340 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TBCBQ99426 244 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D10AQ9BXI6 508 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 KIAA1522Q9P206 1035 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 PTCH2Q9Y6C5 1203 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ADGRA2Q96PE1 1338 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 WDR27A2RRH5 827 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 GRM6O15303 877 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 UNC5CO95185 931 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 RPL22P35268 128 aaKnown RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ACLYP53396 1101 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 SPIRE1Q08AE8 756 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 DDX39BQ13838 428 aaKnown RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 DPYSL3Q14195 570 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ELOAQ14241 798 aaKnown RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 RAET1GQ6H3X3 334 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ZDHHC24Q6UX98 284 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 COPS5Q92905 334 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 RERGQ96A58 199 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 MRPL48Q96GC5 212 aaKnown RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 KLHL28Q9NXS3 571 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 BTBD7Q9P203 1132 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 LACTBL1A8MY62 500 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 FGF10O15520 208 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 LTFP02788 710 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 KDELR1P24390 212 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 CYP2F1P24903 491 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ZNF280AP59817 542 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ADIGQ0VDE8 80 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 DSELQ8IZU8 1212 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ALLCQ8N6M5 410 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 OXNAD1Q96HP4 312 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 EIF2AQ9BY44 585 aaKnown RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 SLC17A7Q9P2U7 560 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 E5RJQ4 531 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 PDE5AO76074 875 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 JAG1P78504 1218 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 MPPE1Q53F39 396 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 TCHHL1Q5QJ38 904 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 SUN3Q8TAQ9 357 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 UBE2E3Q969T4 207 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 CCDC126Q96EE4 140 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 MAML3Q96JK9 1138 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 RBBP8Q99708 897 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 BTBD10Q9BSF8 475 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 FBXO6Q9NRD1 293 aaPredicted RBP11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ATP6V1HQ9UI12 483 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 RIPK3Q9Y572 518 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 RNF103-CHMP3A0A140T963 221 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 A0A1W2PQ67 120 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 TM9SF1O15321 606 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 CCL16O15467 120 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 EOMESO95936 686 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 PRIM2P49643 509 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 GAD2Q05329 585 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 ATAD3BQ5T9A4 648 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 FITM2Q8N6M3 262 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 LRRC46Q96FV0 321 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 MECRQ9BV79 373 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 PORCNQ9H237 461 aa11.05□□□□□ -0.64
CLCN6-202ENST00000346436 MGAT4DA6NG13 374 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 HNRNPRO43390 633 aaKnown RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 ACSL4O60488 711 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 CATP04040 527 aaKnown RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 PTPN1P18031 435 aaKnown RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 FAM124AQ86V42 546 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 CYP4X1Q8N118 509 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 EFCAB3Q8N7B9 438 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 USP6NLQ92738 828 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 GGA2Q9UJY4 613 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 PACSIN3Q9UKS6 424 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 RNF112Q9ULX5 631 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 RUVBL2Q9Y230 463 aaKnown RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 MRPS33Q9Y291 106 aaKnown RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 USP12O75317 370 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 MAFO75444 373 aaPredicted RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 KLHL2O95198 593 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 CCNDBP1O95273 360 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 ACRP10323 421 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 AMPD1P23109 780 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 DSG1Q02413 1049 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 ELP6Q0PNE2 266 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 GSTA3Q16772 222 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms