RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CLEC4MQ9H2X3 399 aaPredicted RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 ERVK-5Q9HDB9 667 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 TMEM191CA6NGB0 347 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 PRRG1O14668 218 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 COPZ1P61923 177 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 IL5RAQ01344 420 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 SLC1A5Q15758 541 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 TBC1D25Q3MII6 688 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 ZFP69Q49AA0 526 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 TIGD7Q6NT04 549 aaPredicted RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 ABHD15Q6UXT9 468 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 HPS6Q86YV9 775 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 UNC45BQ8IWX7 931 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 MAF1Q9H063 256 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 FARP1Q9Y4F1 1045 aaPredicted RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 SPEF2Q9C093 1822 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 H0YC42 278 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 INPP4BO15327 924 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 GP5P40197 560 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 SERPINH1P50454 418 aaKnown RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 TUBA3CQ13748 450 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 CCDC142Q17RM4 750 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 FUT11Q495W5 492 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 N4BP2L1Q5TBK1 243 aaPredicted RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 BROXQ5VW32 411 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 MRNIPQ6NTE8 343 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 TRIM69Q86WT6 500 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 MYO1HQ8N1T3 1032 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 CELF6Q96J87 481 aaKnown RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 SEPHS2Q99611 448 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 MOV10Q9HCE1 1003 aaKnown RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 A0A0B4J269 797 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 H3BSA7 217 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 CYBBP04839 570 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 MSX2P35548 267 aaPredicted RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 LRRC57Q8N9N7 239 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 ADAM32Q8TC27 787 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 RNF103O00237 685 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 DDX3YO15523 660 aaKnown RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 LDLRP01130 860 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 CHRM3P20309 590 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 ATP6V1B2P21281 511 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 RPL22P35268 128 aaKnown RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 ZNF143P52747 638 aaPredicted RBP15.71■□□□□ 0.11
SRPK1-201ENST00000346162 LLGL2Q6P1M3 1020 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 BBS12Q6ZW61 710 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 PLPPR4Q7Z2D5 763 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 ALLCQ8N6M5 410 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 FBXO32Q969P5 355 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 COL20A1Q9P218 1284 aa15.71■□□□□ 0.11
SRPK1-201ENST00000346162 FBP2O00757 339 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 TOMM70O94826 608 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 IRF1P10914 325 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 PTGS2P35354 604 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 CSE1LP55060 971 aaKnown RBP15.71■□□□□ 0.1
SRPK1-201ENST00000346162 NEK5Q6P3R8 708 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 GANCQ8TET4 914 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 OLFM1Q99784 485 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 CD274Q9NZQ7 290 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 SPATA2Q9UM82 520 aa15.71■□□□□ 0.1
SRPK1-201ENST00000346162 WDR27A2RRH5 827 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 COQ9O75208 318 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 OR6B1O95007 311 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 NADKO95544 446 aaPredicted RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 COX4I1P13073 169 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 ATF4P18848 351 aaPredicted RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 MGAT1P26572 445 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 AXLP30530 894 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 ACADVLP49748 655 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 FCGRTP55899 365 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 PAGE2BQ5JRK9 111 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 PTRHD1Q6GMV3 140 aaKnown RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 STK32CQ86UX6 486 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 APOL4Q9BPW4 351 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 GPR63Q9BZJ6 419 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 ST6GALNAC4Q9H4F1 302 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 RBM22Q9NW64 420 aaKnown RBP eCLIP15.7■□□□□ 0.11e-11■□□□□ 10.9
SRPK1-201ENST00000346162 PSMD11O00231 422 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 AREL1O15033 823 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 B4GALT5O43286 388 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 PORP16435 677 aaPredicted RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 PTPN7P35236 360 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 JAM2P57087 298 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 TTC23LQ6PF05 361 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 PTAR1Q7Z6K3 402 aaPredicted RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 PCDH20Q8N6Y1 951 aaKnown RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 MAGEE2Q8TD90 523 aaPredicted RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 BSNDQ8WZ55 320 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 TSPAN18Q96SJ8 248 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 BDH2Q9BUT1 245 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 FICDQ9BVA6 458 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 CROTQ9UKG9 612 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 DPYSL4O14531 572 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 PRLP01236 227 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 GJB1P08034 283 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 HIST1H2AGP0C0S8 130 aaPredicted RBP15.7■□□□□ 0.1
SRPK1-201ENST00000346162 HIST1H2ADP20671 130 aa15.7■□□□□ 0.1
SRPK1-201ENST00000346162 KRT33BQ14525 404 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms