RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ASIC2Q16515 512 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 ZSCAN23Q3MJ62 389 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 ACCSLQ4AC99 568 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 C6orf118Q5T5N4 469 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 KIAA0895LQ68EN5 471 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 NCEH1Q6PIU2 408 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 LINGO4Q6UY18 593 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 NLRP14Q86W24 1093 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 DCAF4L2Q8NA75 395 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 GANCQ8TET4 914 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 TMEM121BQ9BXQ6 578 aaPredicted RBP14.78□□□□□ -0.04
HMGN3-202ENST00000344726 OSBPL2Q9H1P3 480 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 GAREM1Q9H706 876 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 PPARGC1AQ9UBK2 798 aaKnown RBP14.78□□□□□ -0.04
HMGN3-202ENST00000344726 ADAMTS1Q9UHI8 967 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 ILVBLA1L0T0 632 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 FAM47DPA6NHR8 397 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 RNF103O00237 685 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 DDX3XO00571 662 aaKnown RBP eCLIP14.77□□□□□ -0.053e-8■■■□□ 15.7
HMGN3-202ENST00000344726 WNT9AO14904 365 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-202ENST00000344726 ZMPSTE24O75844 475 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 LRIG2O94898 1065 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 ADH1BP00325 375 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 IL1BP01584 269 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 SKILP12757 684 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 C5AR1P21730 350 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 CD27P26842 260 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 ZNF143P52747 638 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-202ENST00000344726 KRT83P78385 493 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 SIM1P81133 766 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-202ENST00000344726 KIF19Q2TAC6 998 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 HLA-BQ31612 363 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 ARL13BQ3SXY8 428 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 SFMBT2Q5VUG0 894 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 NAXDQ8IW45 347 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 DRC7Q8IY82 874 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 PYROXD2Q8N2H3 581 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 NTAN1Q96AB6 310 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 FAM131CQ96AQ9 280 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 OMDQ99983 421 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 C2orf49Q9BVC5 232 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-202ENST00000344726 ZDHHC5Q9C0B5 715 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 SLC32A1Q9H598 525 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 OSGEPQ9NPF4 335 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 FZD4Q9ULV1 537 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 NCKAP1Q9Y2A7 1128 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 SNX11Q9Y5W9 270 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 ACTL7AQ9Y615 435 aa14.77□□□□□ -0.05
HMGN3-202ENST00000344726 TRPM6Q9BX84 2022 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 C1QTNF9BB2RNN3 333 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 KCNK3O14649 394 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 MCF2LO15068 1137 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 HYAL3O43820 417 aaPredicted RBP14.76□□□□□ -0.05
HMGN3-202ENST00000344726 CBFA2T3O75081 653 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 ZNF821O75541 412 aaPredicted RBP14.76□□□□□ -0.05
HMGN3-202ENST00000344726 WNT1P04628 370 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 CTSLP07711 333 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 PLEKP08567 350 aaPredicted RBP14.76□□□□□ -0.05
HMGN3-202ENST00000344726 C1QTNF9P0C862 333 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 GOT1P17174 413 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 AFF3P51826 1226 aaKnown RBP14.76□□□□□ -0.05
HMGN3-202ENST00000344726 ADPRHP54922 357 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 PPP2CBP62714 309 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 PPP2CAP67775 309 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 ARF5P84085 180 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 GNA12Q03113 381 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 SCAPQ12770 1279 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 SLC14A1Q13336 389 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 MAMLD1Q13495 774 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 POM121L1PQ3SYA9 428 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 FIGNQ5HY92 759 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 ZNF783Q6ZMS7 281 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 ATP11CQ8NB49 1132 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 OR8D1Q8WZ84 308 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 VCPIP1Q96JH7 1222 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 SLC6A18Q96N87 628 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 SCNM1Q9BWG6 230 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 EDEM3Q9BZQ6 932 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 PPM1HQ9ULR3 514 aa14.76□□□□□ -0.05
HMGN3-202ENST00000344726 A0A1W2PPC4 97 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 CBX4O00257 560 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 RIOK3O14730 519 aaKnown RBP14.75□□□□□ -0.05
HMGN3-202ENST00000344726 BNIP3LO60238 219 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 KRT37O76014 449 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 CD160O95971 181 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 RHOQP17081 205 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 PTMSP20962 102 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 ACVRL1P37023 503 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 GRIA4P48058 902 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 UBASH3AP57075 661 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 KLHL30Q0D2K2 578 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 PDAP1Q13442 181 aaKnown RBP14.75□□□□□ -0.05
HMGN3-202ENST00000344726 HGSNATQ68CP4 663 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 PLEKHA7Q6IQ23 1121 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 RWDD4Q6NW29 188 aaKnown RBP14.75□□□□□ -0.05
HMGN3-202ENST00000344726 SCYL2Q6P3W7 929 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 DCUN1D2Q6PH85 259 aa14.75□□□□□ -0.05
HMGN3-202ENST00000344726 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.75□□□□□ -0.05
HMGN3-202ENST00000344726 SLFN11Q7Z7L1 901 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms