RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PROSER1Q86XN7 944 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 PGAM4Q8N0Y7 254 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 OTUD5Q96G74 571 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
SMC4-201ENST00000344722 BBIP1A8MTZ0 92 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 ANXA11P50995 505 aaKnown RBP18.32■□□□□ 0.52
SMC4-201ENST00000344722 TBC1D21Q8IYX1 336 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 DSELQ8IZU8 1212 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 TTC30BQ8N4P2 665 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 FAM136AQ96C01 138 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 ELOVL6Q9H5J4 265 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 ZNF70Q9UC06 446 aaPredicted RBP18.32■□□□□ 0.52
SMC4-201ENST00000344722 ZNF221Q9UK13 617 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 AVILO75366 819 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 CCNFP41002 786 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 UNC5AQ6ZN44 842 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 BRSK2Q8IWQ3 736 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 CHST13Q8NET6 341 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 ASZ1Q8WWH4 475 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 RNF157Q96PX1 679 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 DOLKQ9UPQ8 538 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 PRG3Q9Y2Y8 225 aaPredicted RBP18.32■□□□□ 0.52
SMC4-201ENST00000344722 CHD1O14646 1710 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 USP4Q13107 963 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 AMHR2Q16671 573 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 HYIQ5T013 277 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 DPY19L2Q6NUT2 758 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 NECAB2Q7Z6G3 386 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 APOBEC3FQ8IUX4 373 aaKnown RBP18.32■□□□□ 0.52
SMC4-201ENST00000344722 PNPLA8Q9NP80 782 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 MBD2Q9UBB5 411 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 CCNKO75909 580 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 GSSP48637 474 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 PLK1P53350 603 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 NOMO3P69849 1222 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 VSTM1Q6UX27 236 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 C11orf74Q86VG3 221 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 HOPXQ9BPY8 73 aaPredicted RBP18.32■□□□□ 0.52
SMC4-201ENST00000344722 MRPL57Q9BQC6 102 aaKnown RBP18.32■□□□□ 0.52
SMC4-201ENST00000344722 KCNQ5Q9NR82 932 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 SNX15Q9NRS6 342 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 TAS2R1Q9NYW7 299 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 NKX1-2Q9UD57 310 aaPredicted RBP18.32■□□□□ 0.52
SMC4-201ENST00000344722 TELO2Q9Y4R8 837 aa18.32■□□□□ 0.52
SMC4-201ENST00000344722 TCEA3O75764 348 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 ADRB2P07550 413 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 MZF1P28698 734 aaPredicted RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 ZNF143P52747 638 aaPredicted RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 ACTR3P61158 418 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 GTF2BQ00403 316 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 ALDH6A1Q02252 535 aaKnown RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 CRTC3Q6UUV7 619 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 METTL6Q8TCB7 284 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 SAGE2PA6NJ88 616 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 ZBTB11O95625 1053 aaPredicted RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 SPESP1Q6UW49 350 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 CXorf21Q9HAI6 301 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 RBM22Q9NW64 420 aaKnown RBP eCLIP18.31■□□□□ 0.525e-24■■■■■ 66.5
SMC4-201ENST00000344722 COG5Q9UP83 839 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 TK2O00142 265 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 TSPAN19P0C672 248 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 ACO1P21399 889 aaKnown RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 JAM2P57087 298 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 PRR5LQ6MZQ0 368 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 APTXQ7Z2E3 356 aaKnown RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 ERI1Q8IV48 349 aaKnown RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 CIB1Q99828 191 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 ZDHHC18Q9NUE0 388 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 MGAT4DA6NG13 374 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 TISP43B9A030 160 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 TIPRLO75663 272 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 MYL12AP19105 171 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 NDST1P52848 882 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 SLC16A1P53985 500 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 ITGA7Q13683 1181 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 PPP4R4Q6NUP7 873 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 DCP1BQ8IZD4 617 aaKnown RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 ZBTB8BQ8NAP8 495 aaPredicted RBP18.31■□□□□ 0.52
SMC4-201ENST00000344722 LEMD2Q8NC56 503 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 MCFD2Q8NI22 146 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 NPAS2Q99743 824 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 CLPBQ9H078 707 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 TAS2R13Q9NYV9 303 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 FOXO6A8MYZ6 492 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 PCID2Q5JVF3 399 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 BTN2A2Q8WVV5 523 aa18.31■□□□□ 0.52
SMC4-201ENST00000344722 MZT2AQ6P582 158 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 DRAXINQ8NBI3 349 aaPredicted RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 TPD52L3Q96J77 140 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 QKIQ96PU8 341 aaKnown RBP eCLIP18.3■□□□□ 0.527e-7■■■■■ 232.7
SMC4-201ENST00000344722 POLIQ9UNA4 740 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 RBMX2Q9Y388 322 aaKnown RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 BTN3A3O00478 584 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 TBX10O75333 385 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 SLC7A2P52569 658 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 DDX39BQ13838 428 aaKnown RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 PAGE2Q7Z2X7 111 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms