RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 NAPEPLDQ6IQ20 393 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 Q6ZVU0 165 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 ZSCAN30Q86W11 494 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 NEK11Q8NG66 645 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 OR52K2Q8NGK3 314 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 SAP25Q8TEE9 199 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 FRS2Q8WU20 508 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 CCDC114Q96M63 670 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 SLC6A18Q96N87 628 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 SPON2Q9BUD6 331 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 NRSN2Q9GZP1 204 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 GANQ9H2C0 597 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 ANLNQ9NQW6 1124 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 BTBD3Q9Y2F9 522 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 DOCK9Q9BZ29 2069 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 A0A1W2PR77 199 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 TLR4O00206 839 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 ATP9BO43861 1147 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 SNAP91O60641 907 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 JUPP14923 745 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 OR1E1P30953 314 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
SGCA-202ENST00000344627 ADPRHP54922 357 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 E2F1Q01094 437 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 CDR2Q01850 454 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 MYL5Q02045 173 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 UBXN1Q04323 297 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 STX1AQ16623 288 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 HS1BP3Q53T59 392 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 CCDC157Q569K6 752 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 FAM131BQ86XD5 332 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 SH2D3CQ8N5H7 860 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 EMC1Q8N766 993 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 LSM14AQ8ND56 463 aaKnown RBP12.72□□□□□ -0.37
SGCA-202ENST00000344627 PIP4K2CQ8TBX8 421 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 MDM1Q8TC05 714 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 ALG14Q96F25 216 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 PGAP3Q96FM1 320 aaPredicted RBP12.72□□□□□ -0.37
SGCA-202ENST00000344627 SERAC1Q96JX3 654 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 CNDP2Q96KP4 475 aaKnown RBP12.72□□□□□ -0.37
SGCA-202ENST00000344627 C11orf70Q9BRQ4 267 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
SGCA-202ENST00000344627 PREBQ9HCU5 417 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 RALYQ9UKM9 306 aaKnown RBP12.72□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D30Q9Y2I9 924 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 PKD1L2Q7Z442 2459 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 DOCK4Q8N1I0 1966 aa12.72□□□□□ -0.37
SGCA-202ENST00000344627 COL5A1P20908 1838 aaPredicted RBP12.72□□□□□ -0.37
SGCA-202ENST00000344627 CACNA1GO43497 2377 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 EIF4E1BA6NMX2 242 aaKnown RBP12.71□□□□□ -0.37
SGCA-202ENST00000344627 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 TK2O00142 265 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 EPHB6O15197 1021 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 RTN2O75298 545 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 ENDOD1O94919 500 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 MT-CO1P00395 513 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 RRM1P23921 792 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 EPHA8P29322 1005 aaPredicted RBP12.71□□□□□ -0.37
SGCA-202ENST00000344627 MAT2AP31153 395 aaKnown RBP12.71□□□□□ -0.37
SGCA-202ENST00000344627 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
SGCA-202ENST00000344627 DNA2P51530 1060 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 METAP1P53582 386 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 NXPH1P58417 271 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 FMO1Q01740 532 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 STAT4Q14765 748 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 COL28A1Q2UY09 1125 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 SETMARQ53H47 684 aaPredicted RBP12.71□□□□□ -0.37
SGCA-202ENST00000344627 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 LINGO4Q6UY18 593 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 OR7D4Q8NG98 312 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 BAP1Q92560 729 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 NT5C3BQ969T7 300 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 C1orf74Q96LT6 269 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 HAPLN3Q96S86 360 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 DYRK4Q9NR20 520 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 EVA1BQ9NVM1 165 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 VPS51Q9UID3 782 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 TMEM59LQ9UK28 342 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 NOCTQ9UK39 431 aaKnown RBP12.71□□□□□ -0.37
SGCA-202ENST00000344627 SARDHQ9UL12 918 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 RAXQ9Y2V3 346 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 OR51B4Q9Y5P0 310 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 GOLGA4Q13439 2230 aaKnown RBP12.71□□□□□ -0.37
SGCA-202ENST00000344627 AKAP13Q12802 2813 aa12.71□□□□□ -0.37
SGCA-202ENST00000344627 LAMA5O15230 3695 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 A0A0D9SEW6 157 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CXorf51AA0A1B0GTR3 108 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 DRGXA6NNA5 263 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 I6L893 689 aaPredicted RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 K7ERQ8 282 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CBX4O00257 560 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 KPNA3O00505 521 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms