RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 SKILP12757 684 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 PSMA2P25787 234 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 L1CAMP32004 1257 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 PBX1P40424 430 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 ADPRHP54922 357 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 GEMIN4P57678 1058 aaKnown RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 ZBED6P86452 979 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 FAM72AQ5TYM5 149 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 FAM72DQ6L9T8 149 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 PSAPL1Q6NUJ1 521 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 C22orf39Q6P5X5 142 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 FAM72BQ86X60 149 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 PIP4K2CQ8TBX8 421 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 ZNF653Q96CK0 615 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 CEP44Q9C0F1 390 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 OSGEPQ9NPF4 335 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 DNAAF2Q9NVR5 837 aaKnown RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 PPM1HQ9ULR3 514 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 HPCAL4Q9UM19 191 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 GON4LQ3T8J9 2241 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 CXorf51AA0A1B0GTR3 108 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 K7ERQ8 282 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 DDX3XO00571 662 aaKnown RBP eCLIP16.43■□□□□ 0.222e-7■■□□□ 13.3
ATG4B-201ENST00000344376 ATMINO43313 823 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 CER1O95813 267 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 ADRB1P08588 477 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 EPHB2P29323 1055 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 SERPINH1P50454 418 aaKnown RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 CCDC15Q0P6D6 951 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 ARTNQ5T4W7 220 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 NLRP14Q86W24 1093 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 C1orf216Q8TAB5 229 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 MAGEH1Q9H213 219 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 MRPL47Q9HD33 250 aaKnown RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 DYRK4Q9NR20 520 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 CNOT8Q9UFF9 292 aaKnown RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 DNAI1Q9UI46 699 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 FZD10Q9ULW2 581 aa16.43■□□□□ 0.22
ATG4B-201ENST00000344376 LUC7L2Q9Y383 392 aaKnown RBP16.43■□□□□ 0.22
ATG4B-201ENST00000344376 LAMA1P25391 3075 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 UPK3BL1B0FP48 263 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 UPK3BL2E5RIL1 263 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 SMAD6O43541 496 aaKnown RBP16.42■□□□□ 0.22
ATG4B-201ENST00000344376 CREB3O43889 395 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 ZMPSTE24O75844 475 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 PRNPP04156 253 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 IGHV4-34P06331 123 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 CEACAM1P13688 526 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 GLDCP23378 1020 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 CHRNA3P32297 505 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 GRIA4P48058 902 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 CCR5P51681 352 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 SLC14A1Q13336 389 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 ADAT2Q7Z6V5 191 aaKnown RBP16.42■□□□□ 0.22
ATG4B-201ENST00000344376 ZNF354CQ86Y25 554 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 PCDH20Q8N6Y1 951 aaKnown RBP16.42■□□□□ 0.22
ATG4B-201ENST00000344376 OR2A12Q8NGT7 310 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 CPLX3Q8WVH0 158 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 KDM4CQ9H3R0 1056 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 CATSPERBQ9H7T0 1116 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 TM9SF3Q9HD45 589 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 DONSONQ9NYP3 566 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 SARDHQ9UL12 918 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 CAPN11Q9UMQ6 739 aa16.42■□□□□ 0.22
ATG4B-201ENST00000344376 PCDH15Q96QU1 1955 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3DA0A087WVF3 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3IA0A087WXS9 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3EA0A087X179 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3KA0A087X1G2 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 A0A1W2PPC4 97 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3FA6NER0 549 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3LB9A6J9 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 KPNA3O00505 521 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-201ENST00000344376 CBFA2T2O43439 604 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 RNF8O76064 485 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 SERPING1P05155 500 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3HP0C7X1 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 HTR7P34969 479 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 DRD3P35462 400 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 OGDHQ02218 1023 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 SEMA3BQ13214 749 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 POLD3Q15054 466 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-201ENST00000344376 POM121L1PQ3SYA9 428 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3GQ6DHY5 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3CQ6IPX1 549 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TBC1D3Q8IZP1 549 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-201ENST00000344376 PYROXD2Q8N2H3 581 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 RTL3Q8N8U3 475 aaKnown RBP16.41■□□□□ 0.22
ATG4B-201ENST00000344376 DEFB124Q8NES8 71 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TMIEQ8NEW7 156 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 OR2I1PQ8NGU4 316 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 FNIP1Q8TF40 1166 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
ATG4B-201ENST00000344376 SKA1Q96BD8 255 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 PPP1R16AQ96I34 528 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 NCAPGQ9BPX3 1015 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 ACE2Q9BYF1 805 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms