RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 RNF19BQ6ZMZ0 732 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 BPHLQ86WA6 291 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 ARID3BQ8IVW6 561 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 KIF2BQ8N4N8 673 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 ABTB1Q969K4 478 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 RSPRY1Q96DX4 576 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 PIWIL1Q96J94 861 aaKnown RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 TCEANC2Q96MN5 208 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 C19orf43Q9BQ61 176 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 SLC26A6Q9BXS9 759 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 RNF39Q9H2S5 420 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 TIMMDC1Q9NPL8 285 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 WSB2Q9NYS7 404 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 PTTG2Q9NZH5 202 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 MAN1B1Q9UKM7 699 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CAPN6Q9Y6Q1 641 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 INO80B-WBP1J3KQ70 363 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 ZBTB24O43167 697 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 DDAH2O95865 285 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 POMCP01189 267 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 DCNP07585 359 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 VAV1P15498 845 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CD27P26842 260 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 KRT83P78385 493 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 SPEM2Q0P670 501 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 OCLNQ16625 522 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 SPATA24Q86W54 205 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 UHMK1Q8TAS1 419 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 ZNF507Q8TCN5 953 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 ZFRQ96KR1 1074 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 SENP8Q96LD8 212 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 TMEM237Q96Q45 408 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 SLC46A2Q9BY10 475 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 PRM3Q9NNZ6 103 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 DUS2Q9NX74 493 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 TRPM5Q9NZQ8 1165 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 SALL4Q9UJQ4 1053 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 MTF2Q9Y483 593 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 HS3ST3A1Q9Y663 406 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 A0A1B0GTQ1 180 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 BOLA2-SMG1P6H3BVE0 249 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CPLX1O14810 134 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 LATO43561 262 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 SNX3O60493 162 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CCNT1O60563 726 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 MED24O75448 989 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 RFPL2O75678 378 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 GJB6O95452 261 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 SCGB1D2O95969 90 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 GM2AP17900 193 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 TCP1P17987 556 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CD6P30203 668 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 TXKP42681 527 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 GALK1P51570 392 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 DHX9Q08211 1270 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 PPIDQ08752 370 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 ITGA9Q13797 1035 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 TRIP4Q15650 581 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 UAP1Q16222 522 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 FXNQ16595 210 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 BROXQ5VW32 411 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 RESP18Q5W5W9 173 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 PM20D1Q6GTS8 502 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CYP4X1Q8N118 509 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 PPP1R14CQ8TAE6 165 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 ITPKCQ96DU7 683 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 LIN37Q96GY3 246 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 LRIG1Q96JA1 1093 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CGRRF1Q99675 332 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 KXD1Q9BQD3 176 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 NSRP1Q9H0G5 558 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 TPK1Q9H3S4 243 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CLK4Q9HAZ1 481 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 HEBP1Q9NRV9 189 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 RRN3Q9NYV6 651 aa7.51□□□□□ -1.21
ZNF540-202ENST00000343599 LUC7L2Q9Y383 392 aaKnown RBP7.51□□□□□ -1.21
ZNF540-202ENST00000343599 CLDN3O15551 220 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ADH1BP00325 375 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 EIF2S3P41091 472 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 MATKP42679 507 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 DMPKQ09013 629 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CYLC2Q14093 348 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 SLC39A14Q15043 492 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CNGA3Q16281 694 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ZC2HC1CQ53FD0 456 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TTC38Q5R3I4 469 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 POTEHQ6S545 545 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 LRRC34Q8IZ02 419 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 FNDC8Q8TC99 324 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 BSNDQ8WZ55 320 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 MED8Q96G25 268 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TNIP3Q96KP6 325 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 NUDCD1Q96RS6 583 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 EFHD1Q9BUP0 239 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 LRMDAQ9H2I8 198 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 PARVGQ9HBI0 331 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CYP4F11Q9HBI6 524 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 PRELID1Q9Y255 219 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 LNP1A1A4G5 178 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms