RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 NPAS2Q99743 824 aa21.42■■□□□ 1.02
E2F1-201ENST00000343380 PRDM16Q9HAZ2 1276 aa21.42■■□□□ 1.02
E2F1-201ENST00000343380 BFARQ9NZS9 450 aa21.42■■□□□ 1.02
E2F1-201ENST00000343380 CCDC160A6NGH7 325 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 M0QYT0 321 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 CLDN5O00501 218 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 NMBRP28336 390 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 GNL1P36915 607 aaPredicted RBP21.41■■□□□ 1.02
E2F1-201ENST00000343380 PPARGP37231 505 aaPredicted RBP21.41■■□□□ 1.02
E2F1-201ENST00000343380 RGS2P41220 211 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 RANBP1P43487 201 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 ARHGAP1Q07960 439 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 UNC93AQ86WB7 457 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 NT5DC4Q86YG4 428 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 NPWQ8N729 165 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 ZSCAN18Q8TBC5 510 aaPredicted RBP21.41■■□□□ 1.02
E2F1-201ENST00000343380 CASS4Q9NQ75 786 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 RAB26Q9ULW5 256 aa21.41■■□□□ 1.02
E2F1-201ENST00000343380 DNAJC25-GNG10A0A024R161 153 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 EEF2KO00418 725 aaKnown RBP21.4■■□□□ 1.02
E2F1-201ENST00000343380 CYP2C8P10632 490 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 HOXA11P31270 313 aaPredicted RBP21.4■■□□□ 1.02
E2F1-201ENST00000343380 ZNF460Q14592 562 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 KYAT1Q16773 422 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 KIZQ2M2Z5 673 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 C9orf57Q5W0N0 161 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 KCTD11Q693B1 232 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 KCTD4Q8WVF5 259 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 DTNBP1Q96EV8 351 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 SENP6Q9GZR1 1112 aaPredicted RBP21.4■■□□□ 1.02
E2F1-201ENST00000343380 SUDS3Q9H7L9 328 aaPredicted RBP21.4■■□□□ 1.02
E2F1-201ENST00000343380 PRSS51A0A1B0GVH4 220 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 ACOT8O14734 319 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 IRF6O14896 467 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 RNASEH2AO75792 299 aaKnown RBP21.4■■□□□ 1.02
E2F1-201ENST00000343380 ERCC2P18074 760 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 PCSK6P29122 969 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 SCNN1AP37088 669 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 ZBTB17Q13105 803 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 ZYG11AQ6WRX3 759 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 PTAR1Q7Z6K3 402 aaPredicted RBP21.4■■□□□ 1.02
E2F1-201ENST00000343380 CPSF7Q8N684 471 aaKnown RBP21.4■■□□□ 1.02
E2F1-201ENST00000343380 PPP1R13LQ8WUF5 828 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 UPF1Q92900 1129 aaKnown RBP eCLIP21.4■■□□□ 1.02
E2F1-201ENST00000343380 SNX27Q96L92 541 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 PTTG2Q9NZH5 202 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 NDUFA13Q9P0J0 144 aa21.4■■□□□ 1.02
E2F1-201ENST00000343380 PTPN1P18031 435 aaKnown RBP21.39■■□□□ 1.02
E2F1-201ENST00000343380 MAP7Q14244 749 aa21.39■■□□□ 1.02
E2F1-201ENST00000343380 LIPMQ5VYY2 423 aa21.39■■□□□ 1.02
E2F1-201ENST00000343380 PGAM4Q8N0Y7 254 aa21.39■■□□□ 1.02
E2F1-201ENST00000343380 CRYBG2Q8N1P7 616 aa21.39■■□□□ 1.02
E2F1-201ENST00000343380 TMA16Q96EY4 203 aaKnown RBP21.39■■□□□ 1.02
E2F1-201ENST00000343380 APBA2Q99767 749 aa21.39■■□□□ 1.02
E2F1-201ENST00000343380 SETD4Q9NVD3 440 aa21.39■■□□□ 1.02
E2F1-201ENST00000343380 PHF24Q9UPV7 400 aa21.39■■□□□ 1.02
E2F1-201ENST00000343380 COPG1Q9Y678 874 aaKnown RBP21.39■■□□□ 1.02
E2F1-201ENST00000343380 TCAF2A6NFQ2 919 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 CYP2B6P20813 491 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 AKAP5P24588 427 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 GABRB3P28472 473 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 CSRP3P50461 194 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 FAM219BQ5XKK7 198 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 TMEM102Q8N9M5 508 aaPredicted RBP21.39■■□□□ 1.01
E2F1-201ENST00000343380 NPY6RQ99463 290 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 GOLGA2P5Q9HBQ8 144 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 ZBTB26Q9HCK0 441 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 PREBQ9HCU5 417 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 RBPJLQ9UBG7 517 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 VPS28Q9UK41 221 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 PLXNA1Q9UIW2 1896 aa21.39■■□□□ 1.01
E2F1-201ENST00000343380 USP46P62068 366 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 TTLL4Q14679 1199 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 B3GNT6Q6ZMB0 384 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 AHI1Q8N157 1196 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 ADCY4Q8NFM4 1077 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 NT5C3BQ969T7 300 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 SCYL1Q96KG9 808 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 OMDQ99983 421 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 NXF3Q9H4D5 531 aaKnown RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 Q9H521 79 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 ZNF696Q9H7X3 374 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 RUVBL2Q9Y230 463 aaKnown RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 NUP205Q92621 2012 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 TIMM44O43615 452 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 BCAS2O75934 225 aaPredicted RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 SLC35E2BP0CK96 405 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 ME2P23368 584 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 ZFP1Q6P2D0 407 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 AMIGO2Q86SJ2 522 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 ZC3HC1Q86WB0 502 aaKnown RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 CENPLQ8N0S6 344 aaPredicted RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 FSTL5Q8N475 847 aaPredicted RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 PDCD6IPQ8WUM4 868 aaKnown RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 SREK1Q8WXA9 508 aaKnown RBP21.38■■□□□ 1.01
E2F1-201ENST00000343380 HSFY1Q96LI6 401 aa21.38■■□□□ 1.01
E2F1-201ENST00000343380 FZD9O00144 591 aa21.37■■□□□ 1.01
E2F1-201ENST00000343380 HNRNPRO43390 633 aaKnown RBP21.37■■□□□ 1.01
E2F1-201ENST00000343380 DLX3O60479 287 aa21.37■■□□□ 1.01
E2F1-201ENST00000343380 TRPA1O75762 1119 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms