RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TXNRD1Q16881 649 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 GMPPBQ9Y5P6 360 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 ANKDD1BA6NHY2 528 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 RRN3P2A6NIE6 340 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 NOL4O94818 638 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 CRATP43155 626 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 PRMT7Q9NVM4 692 aaPredicted RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 DDIT4Q9NX09 232 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 RAG1P15918 1043 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 PPP3R1P63098 170 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 CCNI2Q6ZMN8 369 aaPredicted RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 DGLUCYQ7Z3D6 616 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF540Q8NDQ6 660 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 ARL15Q9NXU5 204 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 FAM240BA0A1B0GVZ2 78 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 SRCP12931 536 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 COILP38432 576 aaPredicted RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 RBM34P42696 430 aaKnown RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 ATF7IP2Q5U623 682 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 ZCCHC17Q9NP64 241 aaKnown RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 A0A1W2PQJ5 194 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 FBXO21O94952 628 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 NR2F6P10588 404 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 GALCP54803 685 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 RPL10AP62906 217 aaKnown RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 FAPQ12884 760 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 DNAJC16Q9Y2G8 782 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 PCDHGA10Q9Y5H3 936 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 A0A1B0GVC2 190 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 LRIG2O94898 1065 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 TDP2O95551 362 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ACOX1Q15067 660 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ABCA11PQ4W5N1 156 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 HSDL2Q6YN16 418 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ANKFN1Q8N957 763 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF557Q8N988 423 aaPredicted RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 TMEM68Q96MH6 324 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 PLB1Q6P1J6 1458 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 KCNA5P22460 613 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 RRM1P23921 792 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 GPSM2P81274 684 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 VMACQ2NL98 169 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 KBTBD2Q8IY47 623 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 EAF2Q96CJ1 260 aaPredicted RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 OR10H1Q9Y4A9 318 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF780BQ9Y6R6 833 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ATP6V1G2O95670 118 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 SPANXN3Q5MJ09 141 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 FAM131AQ6UXB0 335 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 VIL1P09327 827 aaKnown RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 GPAT2Q6NUI2 795 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 C11orf24Q96F05 449 aaPredicted RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 SCGB3A2Q96PL1 93 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 GRIP2Q9C0E4 1043 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ARHGEF4Q9NR80 690 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 RAD51CO43502 376 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 SCGB2A1O75556 95 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 DLG4P78352 724 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 PDIA5Q14554 519 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 IPCEF1Q8WWN9 437 aaPredicted RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 RNF31Q96EP0 1072 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 RFX4Q33E94 735 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 PPP1R16AQ96I34 528 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 FBXO9Q9UK97 447 aaPredicted RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 SH3D21A4FU49 640 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 M0R129 80 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 CKMP06732 381 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 MAPK7Q13164 816 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ADAM33Q9BZ11 813 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 TLR8Q9NR97 1041 aaKnown RBP17.85■□□□□ 0.45
SMAD4-201ENST00000342988 ALG5Q9Y673 324 aa17.85■□□□□ 0.45
SMAD4-201ENST00000342988 CARNS1A5YM72 827 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 ATXN1P54253 815 aaKnown RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 FAM76BQ5HYJ3 339 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 LRRC20Q8TCA0 184 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 PIH1D2Q8WWB5 315 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 MTMR10Q9NXD2 777 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 VPS26BQ4G0F5 336 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 SLC45A4Q5BKX6 768 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 HYIQ5T013 277 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 MILR1Q7Z6M3 343 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 TMC8Q8IU68 726 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 OR10H5Q8NGA6 315 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 C16orf58Q96GQ5 468 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 TNKS2Q9H2K2 1166 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 M0R036 132 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CASKO14936 926 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 FAM153BP0C7A2 387 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CTSEP14091 401 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 PVALBP20472 110 aaPredicted RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CYP4F2P78329 520 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CYP4F3Q08477 520 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 RAB43Q86YS6 212 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 ADGRF4Q8IZF3 695 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 ARL10Q8N8L6 244 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 PTCD3Q96EY7 689 aaKnown RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 RAVER2Q9HCJ3 691 aaKnown RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 OPTCQ9UBM4 332 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms