RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 VPS37AQ8NEZ2 397 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 LPPQ93052 612 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 RCN3Q96D15 328 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 MFSD3Q96ES6 412 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CLPTM1LQ96KA5 538 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 MARK4Q96L34 752 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ZFP42Q96MM3 310 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 PPP1R10Q96QC0 940 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 CADM1Q9BY67 442 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 RHOJQ9H4E5 214 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 SH3BP1Q9Y3L3 701 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 FGF10O15520 208 aaPredicted RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 SYNCRIPO60506 623 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 WNT3AP56704 352 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 PSME3P61289 254 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ELAVL2Q12926 359 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 KRT33BQ14525 404 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 GPR141Q7Z602 305 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 SLC41A1Q8IVJ1 513 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 MICU2Q8IYU8 434 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 HS6ST3Q8IZP7 471 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 RMND5BQ96G75 393 aaPredicted RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 SLC12A4Q9UP95 1085 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 FAM50BQ9Y247 325 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CLOCKO15516 846 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TSPAN1O60635 241 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 USP2O75604 605 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 ALDH2P05091 517 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 ECHS1P30084 290 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 OTUD3Q5T2D3 398 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 POTEHQ6S545 545 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MYO1HQ8N1T3 1032 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PPTC7Q8NI37 304 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 NSMCE2Q96MF7 247 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TLR8Q9NR97 1041 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 CHRAC1Q9NRG0 131 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 SMPD4Q9NXE4 827 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 HMGXB4Q9UGU5 601 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 AP4S1Q9Y587 144 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 AFDNP55196 1824 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 USP1O94782 785 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TNFAIP8O95379 198 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 KLF10Q13118 480 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MPP2Q14168 576 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 FRG1Q14331 258 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 INSCQ1MX18 579 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 C1orf220Q5T0J3 134 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 GPR142Q7Z601 462 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TAGAPQ8N103 731 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PTGR2Q8N8N7 351 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 RP9Q8TA86 221 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 DLG3Q92796 817 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 FCRL2Q96LA5 508 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 NDNQ99608 321 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MAF1Q9H063 256 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 ACTR8Q9H981 624 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PRKAG2Q9UGJ0 569 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 DERAQ9Y315 318 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TM7SF2O76062 418 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 METTL18O95568 372 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 ALDH1A1P00352 501 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 KLRC2P26717 231 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 BRCC3P46736 316 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CDH13P55290 713 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 RAB10P61026 200 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 SYTL3Q4VX76 610 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 P3H2Q8IVL5 708 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 FAM126BQ8IXS8 530 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 NIPA2Q8N8Q9 360 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 NAT8LQ8N9F0 302 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 BHLHE22Q8NFJ8 381 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 ACOX2Q99424 681 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 SEMA6AQ9H2E6 1030 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MINDY3Q9H8M7 445 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 COG4Q9H9E3 785 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 NMRK2Q9NPI5 230 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 COPG2Q9UBF2 871 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MCM8Q9UJA3 840 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CORO1CQ9ULV4 474 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 ST3GAL5Q9UNP4 418 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 LZTS1Q9Y250 596 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 FAM32AQ9Y421 112 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 C22orf31O95567 290 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CSH1P0DML2 217 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CSH2P0DML3 217 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MBL2P11226 248 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 NUP107P57740 925 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TCEAL1Q15170 157 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PFKFB4Q16877 469 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 EML3Q32P44 896 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 RETSATQ6NUM9 610 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 LGI2Q8N0V4 545 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 FOPNLQ96NB1 174 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 KCTD15Q96SI1 283 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 ADGRE3Q9BY15 652 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 POLR1EQ9GZS1 481 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 PRDM5Q9NQX1 630 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 FETUBQ9UGM5 382 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 POLG2Q9UHN1 485 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms