RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 C12orf4Q9NQ89 552 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 GDAP2Q9NXN4 497 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 PACSIN3Q9UKS6 424 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 A0A0B4J269 797 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 ENPP3O14638 875 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 NUAK1O60285 661 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 LPXNO60711 386 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 TRAF2Q12933 501 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 NFATC3Q12968 1075 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 NME3Q13232 169 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 PMS2P3Q13401 168 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 TUBB3Q13509 450 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 SMU1Q2TAY7 513 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 UBE2UQ5VVX9 321 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 TMC5Q6UXY8 1006 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 ZBTB33Q86T24 672 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 TOR1AIP2Q8NFQ8 470 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 LILRB1Q8NHL6 650 aaPredicted RBP12.07□□□□□ -0.48
RTN3-203ENST00000341307 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 RILPQ96NA2 401 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 NANOGQ9H9S0 305 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 ITGA11Q9UKX5 1188 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 SLC8A2Q9UPR5 921 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 EXTL3O43909 919 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 MAFO75444 373 aaPredicted RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 RFX1P22670 979 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 MAN1A1P33908 653 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 TNFSF9P41273 254 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 GNG2P59768 71 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 GPX6P59796 221 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 BST1Q10588 318 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 SREBF2Q12772 1141 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 DNASE1L3Q13609 305 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 STILQ15468 1287 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 NRF1Q16656 503 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 PPP4R4Q6NUP7 873 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 CDR2LQ86X02 465 aaPredicted RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 SNX29P2Q8IUI4 249 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 FAM71AQ8IYT1 594 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 ELMOD2Q8IZ81 293 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 TMEM102Q8N9M5 508 aaPredicted RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 BBOF1Q8ND07 529 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 TMC2Q8TDI7 906 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 DPF3Q92784 378 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 ALKBH8Q96BT7 664 aaKnown RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 PPP1R16BQ96T49 567 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 FAM118BQ9BPY3 351 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 DHRS4Q9BTZ2 278 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 ZNF304Q9HCX3 659 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 THG1LQ9NWX6 298 aaKnown RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 H7C0C1 242 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 M0QX08 132 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 FTLP02792 175 aaPredicted RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 KLRC2P26717 231 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 ARL1P40616 181 aaPredicted RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 LBX1P52954 281 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 MFAP3P55082 362 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 PTK2BQ14289 1009 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 NFE2Q16621 373 aaPredicted RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 ARMCX2Q7L311 632 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 DTX3Q8N9I9 347 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 TERB1Q8NA31 727 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 MINDY2Q8NBR6 621 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 RNF149Q8NC42 400 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 ZNF597Q96LX8 424 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 NT5C1BQ96P26 610 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 VPS35Q96QK1 796 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 COQ7Q99807 217 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 CIB1Q99828 191 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 MECRQ9BV79 373 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 ARHGAP39Q9C0H5 1083 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 C20orf27Q9GZN8 174 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 CLPBQ9H078 707 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 RNPEPQ9H4A4 650 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 MROH8Q9H579 483 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 PPCSQ9HAB8 311 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 RBAKQ9NYW8 714 aaPredicted RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 KCNN3Q9UGI6 736 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 NOCTQ9UK39 431 aaKnown RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 CNOT11Q9UKZ1 510 aaKnown RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 SLC27A5Q9Y2P5 690 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 COQ4Q9Y3A0 265 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 SPEF1Q9Y4P9 236 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 AP4S1Q9Y587 144 aa12.06□□□□□ -0.48
RTN3-203ENST00000341307 ZNFX1Q9P2E3 1918 aaKnown RBP12.06□□□□□ -0.48
RTN3-203ENST00000341307 SYCE1LA8MT33 242 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 SLC22A1O15245 554 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 IDH3BO43837 385 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 BANF1O75531 89 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 KRT5P13647 590 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 TFDP1Q14186 410 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 RAB39AQ14964 217 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 AGMOQ6ZNB7 445 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 PRR23CQ6ZRP0 262 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms