RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 PITPNM3Q9BZ71 974 aa11.96□□□□□ -0.49
C2orf88-201ENST00000340623 SLC13A1Q9BZW2 595 aa11.96□□□□□ -0.49
C2orf88-201ENST00000340623 CSNK1G1Q9HCP0 422 aa11.96□□□□□ -0.49
C2orf88-201ENST00000340623 TDP1Q9NUW8 608 aa11.96□□□□□ -0.49
C2orf88-201ENST00000340623 TMEM30AQ9NV96 361 aa11.96□□□□□ -0.49
C2orf88-201ENST00000340623 E2F8A0AVK6 867 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 A8MX80 341 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 AP3B1O00203 1094 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 STX7O15400 261 aaKnown RBP11.96□□□□□ -0.5
C2orf88-201ENST00000340623 RPSAP08865 295 aaKnown RBP11.96□□□□□ -0.5
C2orf88-201ENST00000340623 ATF6P18850 670 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 PBX2P40425 430 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 GNA12Q03113 381 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 POM121L1PQ3SYA9 428 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 SPPL3Q8TCT6 385 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 FRMD8Q9BZ67 464 aaPredicted RBP11.96□□□□□ -0.5
C2orf88-201ENST00000340623 SLC39A8Q9C0K1 460 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 PABPC3Q9H361 631 aaKnown RBP11.96□□□□□ -0.5
C2orf88-201ENST00000340623 TASP1Q9H6P5 420 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 COMMD8Q9NX08 183 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 TBC1D14Q9P2M4 693 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 WNT6Q9Y6F9 365 aa11.96□□□□□ -0.5
C2orf88-201ENST00000340623 ATP5BP06576 529 aaKnown RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 IL9RQ01113 521 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 UBE3AQ05086 875 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 STAT4Q14765 748 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 TCEAL1Q15170 157 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 PARP6Q2NL67 630 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 OR52K1Q8NGK4 314 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 GRIN3AQ8TCU5 1115 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 DUS2Q9NX74 493 aaKnown RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 ZNF510Q9Y2H8 683 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 HCFC2Q9Y5Z7 792 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 SLC30A1Q9Y6M5 507 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 H0YGN5 161 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 BANF1O75531 89 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 CNTN5O94779 1100 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 PIRTP0C851 137 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 SSTR1P30872 391 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 GDF10P55107 478 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 SESN3P58005 492 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 ACTN3Q08043 901 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 FNDC3BQ53EP0 1204 aaKnown RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 MS4A13Q5J8X5 152 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 DUPD1Q68J44 220 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 PM20D1Q6GTS8 502 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 ARID3BQ8IVW6 561 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 PTPRN2Q92932 1015 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 PSMG2Q969U7 264 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 CCDC97Q96F63 343 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 LRRC40Q9H9A6 602 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 GDF3Q9NR23 364 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 NENFQ9UMX5 172 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 KPNA3O00505 521 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 BUD23O43709 281 aaKnown RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 SUN1O94901 812 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 ZNF844Q08AG5 666 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 XRCC4Q13426 336 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 TSTA3Q13630 321 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 TMCO4Q5TGY1 634 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 FYB2Q5VWT5 728 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 TRNP1Q6NT89 227 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 OTOP3Q7RTS5 596 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 SDCCAG8Q86SQ7 713 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 EXT2Q93063 718 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 KLHL29Q96CT2 875 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 RIPOR3Q96MK2 946 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 OSBPL2Q9H1P3 480 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 EPN3Q9H201 632 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 ZFP14Q9HCL3 533 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 CTNNAL1Q9UBT7 734 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 G3BP2Q9UN86 482 aaKnown RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 TMEM120BA0PK00 339 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 FAM47DPA6NHR8 397 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 GPNMBQ14956 572 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 NCBP2-AS2Q69YL0 99 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 FAM109BQ6ICB4 259 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 TMC3Q7Z5M5 1100 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 ZSCAN18Q8TBC5 510 aaPredicted RBP11.95□□□□□ -0.5
C2orf88-201ENST00000340623 MIEF2Q96C03 454 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 CHMP6Q96FZ7 201 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 FGFR1OP2Q9NVK5 253 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 PCDHA11Q9Y5I1 949 aa11.95□□□□□ -0.5
C2orf88-201ENST00000340623 A0A0G2JND7 137 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 IGSF6O95976 241 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 ADH1CP00326 375 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 KITP10721 976 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 CDH17Q12864 832 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 SMYD5Q6GMV2 418 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 CMTM8Q8IZV2 173 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 RPL10LQ96L21 214 aaKnown RBP11.94□□□□□ -0.5
C2orf88-201ENST00000340623 ZBP1Q9H171 429 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 LCTP09848 1927 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 CLUHO75153 1309 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 EIF4E1BA6NMX2 242 aaKnown RBP11.94□□□□□ -0.5
C2orf88-201ENST00000340623 TYK2P29597 1187 aa11.94□□□□□ -0.5
C2orf88-201ENST00000340623 PPARGP37231 505 aaPredicted RBP11.94□□□□□ -0.5
C2orf88-201ENST00000340623 CDH4P55283 916 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms